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  1. Transcript 'Moocci.CG.ELv1_2.S28...'

Transcript Model

Transcript Id

Moocci.CG.ELv1_2.S289045.g07141.01.t

Possible name(s)

ACTA1; ACTA2; ACTC1

Location

S289045 [3,814 / 5,969]

Sequences

Amino acid sequence

Length: 483

>Moocci.CG.ELv1_2.S289045.g07141.01.p
MSSEEEDQTAIVCDNGSGLVKSGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDE
AQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANRE
KMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDCGDGVSHNVPIYEGYALPHAIAR
LDLAGRDLTDYLMKILTERGYSFVTTAERRTTGIVLDAGDGVSHNVPIYEGYALPHAIAR
LDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFEQEMATAASSTSLE
KSYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMNYELPDGQVITIGN
ERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSGGTTMYPGIADR
MQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDEAGPSIVHR
KCF

Nucleotide sequence

Length: 1,452

>Moocci.CG.ELv1_2.S289045.g07141.01.t
ATGTCGTCAGAAGAAGAAGATCAAACCGCCATCGTCTGTGACAACGGATCGGGATTAGTG
AAGTCTGGATTCGCAGGAGATGATGCACCAAGAGCTGTCTTCCCCTCCATTGTTGGAAGA
CCAAGGCATCAAGGTGTCATGGTTGGTATGGGCCAAAAAGATTCTTATGTTGGAGATGAA
GCTCAAAGCAAAAGAGGAATCCTTACCTTGAAGTATCCAATTGAACACGGCATCATCACT
AATTGGGATGACATGGAAAAAATCTGGCATCATACTTTTTACAACGAACTTCGAGTAGCA
CCAGAAGAACACCCAACTCTCCTAACCGAAGCCCCACTTAACCCAAAAGCCAACCGAGAG
AAAATGACCCAAATTATGTTTGAAACCTTCAACGTACCAGCTATGTACGTCGCTATTCAA
GCTGTCCTCTCTTTGTACGCATCTGGAAGAACCACAGGTATCGTTCTTGACTGTGGTGAT
GGAGTTTCACACAACGTACCCATCTATGAAGGATACGCTCTTCCACATGCTATCGCTCGA
TTGGATTTGGCTGGTCGCGATTTGACTGATTACCTCATGAAGATCTTGACAGAAAGAGGT
TACTCCTTCGTCACAACTGCTGAGCGCCGAACAACTGGAATAGTTCTGGATGCTGGAGAT
GGTGTTTCACACAACGTACCCATCTACGAAGGATACGCTCTTCCCCACGCTATTGCTCGA
TTGGATTTAGCTGGACGAGACTTAACCGATTACCTCATGAAGATCCTAACAGAACGAGGA
TACTCTTTCGTCACAACAGCTGAACGTGAAATCGTTCGAGACATCAAGGAAAAACTTTGT
TACGTTGCACTTGACTTTGAACAGGAAATGGCCACCGCTGCTTCATCAACATCTCTTGAA
AAGAGCTACGAACTTCCCGATGGGCAAGTTATCACGATCGGTAACGAAAGATTCCGATGT
CCCGAAACCCTTTTTCAACCATCCTTTATTGGAATGGAATCAGCTGGTATCCATGAGACA
ACCTACAACTCGATCATGAATTACGAATTGCCCGATGGACAAGTCATTACAATCGGTAAT
GAAAGATTCAGATGTCCAGAAACACTTTTCCAACCATCCTTCATTGGAATGGAATCAGCT
GGTATCCACGAGACAACCTACAACTCAATCATGAAGTGTGATATTGATATCAGAAAGGAC
TTATACGCAAACAATGTTCTCTCAGGAGGCACCACAATGTACCCAGGTATCGCTGATCGT
ATGCAGAAAGAAATCACAGCTCTTGCACCGAGCACAATGAAGATTAAAATCATCGCTCCT
CCTGAACGAAAATACTCAGTCTGGATTGGAGGATCGATCCTTGCGTCTCTTTCAACTTTC
CAACAGATGTGGATCTCCAAACAAGAATATGATGAAGCCGGTCCATCTATTGTTCACAGA
AAATGCTTCTAA

InterProScan

PANTHER
Actin (IPR004000) - T[4-210] 0.0 - T[210-346] 0.0 - T[347-482] 0.0
Pfam
Actin (IPR004000) - T[7-203] 4.3E-75 - T[207-346] 5.5E-37 - T[347-483] 8.6E-60
SMART
Actin (IPR004000) - T[8-483] 9.3E-226
PRINTS
Actin (IPR004000) - T[29-38] 2.8E-45 - T[52-63] 2.8E-45 - T[64-86] 2.8E-45 - T[118-131] 2.8E-45 - T[143-162] 2.8E-45
ProSitePatterns
Actin_CS (IPR004001) - T[56-66] . - T[464-472] .
ProSitePatterns
Actin/actin-like_CS (IPR020902) - T[107-119] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
ACTA_HUMAN 73.542 % 686 0
ACTS_HUMAN 72.917 % 682 0
ACTC_HUMAN 73.333 % 684 0