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  1. Transcript 'KH2012:KH.C1.1220.v2...' > 
  2. Clone 'cibd059o17' > 
  3. Transcript 'Moocul.CG.ELv1_2.S20...' > 
  4. Transcript 'Cisavi.CG.ENS81.R49....' > 
  5. Transcript 'Moocci.CG.ELv1_2.S31...'

Transcript Model

Transcript Id

Moocci.CG.ELv1_2.S313125.g08075.01.t

Possible name(s)

MUC4; SF3B1

Gene model

Moocci.CG.ELv1_2.S313125.g08075

Location

S313125 [134,116 / 138,133]

Sequences

Amino acid sequence

Length: 1,338

>Moocci.CG.ELv1_2.S313125.g08075.01.p
METREDYVAQIEAVQRQKTLLDEKHENGNAEPEGEEDENAKLGGDAFFDQEIYGGSKSKF
AGYVTSIAPNEQEDDDDVEAPAAPLLGKKQTYSAPAAVLNDIPQAEKDHDPFAETRSQPI
LQREDQYRRQRLQRAISPARHDPFADGGMTPDPKLAQYRDIMTSQNLTKEEREIRDRITD
KMKSGDLKVSKEVPKPVPTRKRRWDATPTPDASKKRSNWDAADSTPQVAHWDETPGRAKG
SETPGSGITPGPSTRRWDATPSHIGSGAVTPGRGTTPGHATPAGVGTTPSVRKNRWDETP
KTERETPGRSMGWAETPRVDQVGDDVVQPGGTSKRKSRWDLTPAAATPGNQTPGSATPIF
TPGGTPSSFTPKSAMGTPGAGATPSMFTPSGVTPAGSLAMGMQTPTPGHLMSMTPEQLQT
WRWEREIDERNRSLTDDELDTMFPPGYKVLPPPNGYIPIRTPARKITATPTPMMQTGFHI
QVEDKSVKGITDQPSGNLPFLKPDDIQYFDKLLVEVDESTLSPEEQKERKIMKLLLKIKN
GTPPMRKSALRQVTDKAREFGAGPLFNQILPLLMSPTLEDQERHLLVKVIDRILYKLDDL
VRPYVHKILVVIEPLLIDEDYYARVEGREIISNLAKAAGLATMISVMRPDIDNMDEYVRN
TTARAFAVVASALGIPSLLRFLKAVCRSKKSWQARHTGIKITQQIAILMGCAILPHLRSL
VEIIEHGLEDEQQKVRTITALALAALAEAATPYGIESFDSVLKPLWKGIRTHRGKGLAAF
LKAIGYLIPLMDAEYANYYTKEVMLILIREFQSPDEEMKKIVLKVVKQCCGTDGVEAPYI
KAEILPSFFKYFWNHRMALDRRNYRQLVDTTVEIANKVGPAEMIQRIVDDLKDENEQYRK
MVMETIDKVLVNLGASEIDHRLEEQLIDGILYAFQEQTTEDIVMLNGFGTVVNTLGKRVK
AYLPQICGTVLWRLNNKSAKVRQQAADLISRISIVMKTCQEEKLMGHLGVVLYEYLGEEY
PEVLGSILGALKAIVNVIGMHKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRG
AEYVSAREWMRICFELLELLKAHKKSIRRAAVNTFGYIAKAIGPHDVLATLLNNLKVQER
QNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKAMSFLFEYIGEMGKDYI
YAVTPLLEDALMERDLVHRQIASAAIGHMALGVYGFGCEDALNHLLNYVWPNIFETSPHV
IQAVMSAIDGLRIALGPARLMQYCLQGLFHPARKVRDVYWKIYNGVYIGAQDSVVPSYPR
FYNDEKNQYVRYELDYVL

Nucleotide sequence

Length: 4,017

>Moocci.CG.ELv1_2.S313125.g08075.01.t
ATGGAAACTAGGGAAGATTATGTTGCACAAATTGAAGCTGTGCAACGACAAAAAACTTTG
CTTGACGAGAAACATGAAAATGGCAATGCTGAGCCGGAGGGTGAAGAAGACGAAAACGCA
AAGTTAGGAGGAGATGCATTTTTTGATCAAGAAATCTATGGAGGTTCAAAGAGCAAATTT
GCAGGTTATGTTACTTCAATTGCTCCAAATGAACAAGAAGATGATGATGATGTTGAGGCA
CCTGCTGCCCCCTTGTTAGGCAAAAAACAAACTTACAGTGCACCCGCTGCTGTGTTGAAT
GATATTCCACAAGCTGAAAAAGACCATGATCCATTTGCTGAAACAAGATCACAGCCCATC
TTACAAAGAGAAGATCAATATAGGAGGCAGAGATTACAGCGTGCTATTTCTCCAGCAAGA
CATGATCCCTTTGCTGATGGTGGGATGACTCCTGATCCTAAACTTGCACAGTACAGAGAT
ATCATGACAAGTCAAAATTTAACCAAAGAAGAAAGAGAAATTCGTGACAGAATAACTGAT
AAAATGAAGTCGGGAGATTTAAAAGTTTCTAAGGAAGTGCCAAAACCAGTTCCAACAAGA
AAACGCAGATGGGATGCAACTCCCACACCTGATGCTTCAAAAAAGCGTAGTAACTGGGAT
GCAGCTGATTCTACACCACAAGTTGCGCATTGGGATGAAACTCCAGGTAGAGCAAAAGGG
AGTGAAACACCTGGATCAGGTATAACTCCTGGGCCTAGTACAAGGAGATGGGATGCTACA
CCAAGTCATATTGGTTCTGGTGCTGTTACACCAGGTAGGGGTACCACTCCCGGCCATGCA
ACCCCTGCTGGTGTTGGAACCACTCCAAGTGTAAGGAAAAATAGATGGGATGAAACACCT
AAAACAGAAAGAGAGACACCAGGCCGTTCTATGGGTTGGGCAGAAACTCCTCGGGTTGAC
CAAGTTGGTGATGATGTTGTACAGCCTGGTGGAACTAGTAAGCGAAAATCTAGATGGGAT
TTAACACCAGCAGCAGCCACACCTGGAAATCAAACCCCAGGAAGTGCAACCCCCATTTTT
ACACCAGGTGGAACACCATCTTCATTTACCCCCAAATCTGCAATGGGTACACCTGGAGCT
GGCGCTACTCCATCAATGTTTACCCCATCTGGAGTAACACCAGCTGGATCTTTAGCTATG
GGAATGCAAACTCCAACTCCAGGTCATTTGATGTCCATGACTCCAGAACAGCTACAAACC
TGGAGATGGGAAAGAGAAATTGATGAACGAAACAGATCTCTGACTGACGATGAGTTGGAC
ACAATGTTCCCTCCTGGTTATAAAGTTCTTCCACCCCCAAATGGTTACATTCCAATAAGA
ACTCCAGCCAGGAAGATTACAGCTACACCAACACCAATGATGCAAACAGGTTTCCACATA
CAAGTTGAAGATAAATCGGTAAAAGGAATAACAGATCAGCCATCAGGAAACTTGCCATTT
TTGAAACCAGATGATATACAGTATTTTGATAAACTCCTGGTAGAAGTTGATGAATCTACT
TTAAGTCCAGAAGAACAAAAAGAAAGAAAAATAATGAAATTATTACTGAAGATTAAAAAT
GGCACTCCACCAATGAGAAAAAGTGCTTTAAGACAAGTGACAGACAAAGCCAGAGAATTT
GGTGCTGGCCCACTATTCAATCAAATTCTTCCATTGCTAATGTCACCTACATTAGAAGAT
CAAGAGAGACATCTTTTGGTCAAAGTTATTGATAGAATCTTGTACAAACTCGATGATTTA
GTCCGACCTTATGTACATAAAATTCTTGTGGTTATTGAACCGCTTTTGATTGATGAAGAT
TATTATGCTCGTGTTGAAGGCAGAGAAATTATTTCAAATTTGGCAAAAGCAGCGGGTTTG
GCAACTATGATTTCAGTAATGAGACCCGACATAGATAACATGGATGAATATGTGCGTAAC
ACAACTGCTAGAGCTTTTGCTGTTGTTGCCTCAGCTTTGGGAATCCCTTCTTTGTTGAGA
TTTTTAAAGGCTGTGTGTAGAAGTAAAAAATCATGGCAAGCCAGGCATACTGGAATTAAA
ATTACACAGCAAATTGCTATTCTTATGGGATGTGCTATTTTACCACATCTAAGAAGTTTG
GTCGAAATTATTGAACATGGTTTAGAGGATGAACAACAAAAGGTGAGAACTATTACAGCT
CTTGCTTTGGCTGCGTTGGCAGAAGCTGCAACTCCATATGGTATTGAGTCTTTTGACAGT
GTCTTGAAACCTCTATGGAAAGGTATTAGAACACACAGAGGAAAAGGTTTGGCTGCTTTT
CTCAAAGCCATTGGGTATCTTATTCCACTTATGGACGCAGAATATGCTAACTATTATACT
AAAGAAGTTATGTTGATTTTGATTCGAGAATTTCAGTCCCCTGACGAAGAGATGAAAAAG
ATTGTATTGAAGGTAGTGAAGCAATGTTGCGGTACAGATGGTGTTGAAGCACCGTATATT
AAGGCAGAAATTCTTCCTTCATTTTTTAAGTATTTTTGGAACCACAGAATGGCTTTGGAT
CGAAGGAACTACAGGCAACTTGTGGACACCACAGTAGAAATTGCCAACAAAGTTGGACCA
GCTGAAATGATACAACGAATTGTTGATGACCTTAAAGATGAAAACGAACAGTATCGTAAA
ATGGTAATGGAGACAATTGACAAAGTTTTAGTAAATTTGGGAGCGTCTGAAATCGATCAC
AGACTAGAAGAACAACTTATTGATGGTATTCTTTATGCTTTCCAAGAACAGACAACAGAA
GATATAGTCATGTTAAATGGATTTGGTACTGTTGTTAACACATTGGGGAAAAGAGTAAAG
GCTTACTTGCCACAAATTTGTGGTACTGTACTGTGGCGATTAAACAACAAATCTGCAAAA
GTACGACAACAAGCTGCAGATTTGATTTCAAGGATCTCAATTGTCATGAAAACATGCCAA
GAAGAAAAATTAATGGGACATCTTGGTGTTGTGTTATATGAGTACTTGGGAGAAGAATAC
CCAGAAGTATTAGGTTCTATTTTAGGTGCTTTAAAAGCTATAGTGAATGTGATTGGAATG
CACAAAATGACGCCACCTATAAAAGATTTACTGCCACGATTGACACCAATTTTGAAAAAC
AGACATGAAAAAGTACAAGAAAACTGTATCGATCTGGTTGGACGAATTGCAGACAGAGGA
GCGGAATATGTGAGTGCCAGGGAATGGATGCGAATATGCTTTGAATTGTTGGAATTGCTT
AAAGCGCACAAAAAATCTATTCGAAGAGCGGCGGTAAATACATTTGGTTATATTGCCAAA
GCAATTGGTCCACATGATGTCCTAGCTACTTTGCTAAATAACTTAAAAGTACAGGAACGT
CAAAACAGAGTTTGTACGACAGTTGCTATTGCCATTGTTGCAGAAACTTGTTCCCCTTTT
ACTGTTTTACCTGCTTTGATGAATGAATACAGAGTTCCTGAGTTAAATGTACAAAATGGT
GTTCTAAAAGCGATGTCATTTTTATTTGAATACATAGGGGAAATGGGAAAAGATTATATA
TACGCTGTAACCCCATTGCTTGAAGATGCTTTAATGGAGCGAGATTTAGTTCATAGGCAA
ATTGCGTCTGCCGCTATTGGACATATGGCACTTGGTGTCTATGGCTTTGGTTGTGAAGAT
GCTCTTAATCATTTACTGAACTATGTTTGGCCAAATATTTTCGAGACATCTCCACATGTA
ATCCAAGCAGTTATGTCAGCAATTGATGGTTTAAGAATTGCTTTGGGCCCAGCGAGATTA
ATGCAATATTGTCTTCAAGGTTTATTTCACCCTGCTAGAAAAGTGAGGGACGTTTATTGG
AAAATATACAACGGTGTGTATATTGGGGCTCAAGACAGTGTAGTCCCATCTTACCCAAGA
TTTTATAATGACGAAAAGAACCAATATGTGAGATATGAGCTGGACTATGTACTCTAA

InterProScan

Pfam
SF3b_su1 (IPR015016) - T[332-485] 4.3E-41
Gene3D
ARM-like (IPR011989) - T[514-760] 8.5E-7 - T[816-1232] 3.8E-23
SUPERFAMILY
ARM-type_fold (IPR016024) - T[534-620] 2.66E-97 - T[656-1135] 2.66E-97 - T[1173-1332] 2.66E-97
ProSiteProfiles
HEAT_type_2 (IPR021133) - T[720-758] 8.663

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SF3B1_HUMAN 78.09 % 2100 0