- Region 'REG00000554' >
- Molecular Tool 'Titf>Raldh2-TALEN (Yoshida2017)' >
- Clone 'ma177k08' >
- Transcript 'KH2012:KH.C4.547.v1....' >
- Transcript 'Moocci.CG.ELv1_2.S32...'
Transcript Model
Transcript Id
Moocci.CG.ELv1_2.S325189.g08507.01.t
Possible name(s)
FBLN1; HMCN1; HMCN2
Gene model
Location
S325189 [320 / 3,495]
Amino acid sequence
Length: 434
>Moocci.CG.ELv1_2.S325189.g08507.01.p
LDETGQYCLDEDECATQEPCEHFCQNTLGSFSCSCGEGFRIGNNGLDCEDIDECNDNQVS
CVAPTQCVNTHGSYQCEVVCEAGYEQSEDLTACTDIDECSSEGERVCEHICFNTPGSFSC
SCRDGFRTVGQTRCEDINECEQGACYGQIDQCVNSIGSYNCLNQCATGFEMVDGECLDVD
ECVDPSLNVCEQGCENVDGSYRCLCNIGYIRNSRLQKCIDVDECAVSAKTCQYRCSNTPG
SFKCYCPKGYRVADNGRTCDDINECIEGGPKCASSDEMCANTFGGFDCVNTQCPETYIRR
NGVCVKECLTRDCPKKYKHFLRFNSTFVRVGLEGGQPLLTLFVSYVGPSGELERHRNTRF
QILTPPYIRSAQLFGLRGANSEQGIIYVKTKLLRRHISWYKLRVSAKSTKVDGSLEYDTV
FNLYINVAPNPFEE
Nucleotide sequence
Length: 1,418
>Moocci.CG.ELv1_2.S325189.g08507.01.t
TTAGATGAAACTGGCCAGTATTGTCTAGATGAAGATGAGTGTGCCACTCAAGAACCATGC
GAACACTTTTGTCAGAACACACTTGGATCTTTCTCTTGCTCATGTGGAGAAGGATTCCGT
ATTGGAAACAATGGTCTGGATTGTGAAGACATTGATGAATGCAACGACAACCAGGTTTCT
TGTGTTGCACCCACACAATGTGTGAATACACACGGTTCTTACCAATGTGAAGTTGTGTGT
GAGGCAGGCTATGAACAATCTGAAGACTTAACTGCTTGTACTGATATTGATGAATGTTCA
TCTGAGGGTGAGAGAGTTTGTGAGCATATTTGTTTCAACACTCCTGGATCATTCAGCTGT
TCTTGTCGTGATGGGTTTAGAACAGTCGGACAAACAAGATGTGAAGATATCAATGAGTGT
GAACAAGGAGCCTGCTACGGCCAGATAGATCAATGTGTGAACTCTATTGGTTCCTATAAT
TGTTTAAACCAATGTGCAACTGGATTTGAAATGGTAGATGGAGAATGTCTAGATGTTGAT
GAGTGTGTGGATCCTAGTTTGAACGTATGTGAACAAGGTTGTGAAAATGTTGATGGATCA
TACAGATGTCTCTGCAATATCGGGTACATTAGAAACTCACGACTGCAGAAGTGTATTGAT
GTTGATGAATGTGCTGTGTCTGCAAAAACTTGTCAATACAGATGCAGTAACACACCAGGA
AGCTTCAAGTGTTACTGTCCAAAGGGATACAGAGTTGCTGATAATGGCAGAACTTGTGAT
GACATAAATGAATGCATAGAAGGTGGACCAAAATGTGCTTCATCAGATGAAATGTGCGCC
AACACATTTGGTGGTTTTGATTGTGTCAACACACAATGTCCAGAAACCTATATAAGAAGA
AATGGGGTATGTGTTAAAGAATGTTTGACCAGAGACTGTCCTAAAAAGTATAAACACTTT
TTGCGTTTTAATTCTACTTTTGTAAGAGTTGGATTGGAAGGAGGTCAACCACTTTTGACA
TTATTTGTCTCATATGTGGGCCCATCTGGTGAATTGGAACGTCACAGAAATACAAGATTT
CAAATCTTAACACCTCCATACATTCGTTCTGCTCAACTGTTTGGACTACGAGGGGCAAAT
TCAGAGCAAGGAATAATATATGTAAAAACAAAACTGCTTAGAAGACACATAAGCTGGTAT
AAACTGCGTGTTAGTGCAAAGTCAACTAAAGTGGATGGCTCGTTAGAATACGATACAGTA
TTTAATCTGTATATAAATGTTGCACCAAATCCTTTTGAGGAATAATCCTTTTGAGGAATA
ATTCAATTTTTTCTACTTCATCCTTTTAAAAGTCTTTTTAAAGTGGTTTTTACATAGAAT
AATTCAGCGAAATTTTCCATCATGTACAAAGTTTTATA
| SUPERFAMILY |
Growth_fac_rcpt_cys_sf (IPR009030) - T[5-140] 1.65E-12 |
| SMART |
EGF-like_Ca-bd_dom (IPR001881) - T[10-49] 2.1E-8 - T[50-94] 7.1E-7 - T[95-135] 1.4E-11 - T[136-177] 4.5E-4 - T[178-219] 1.0E-7 - T[220-260] 1.4E-10 - T[261-305] 0.012 |
| Pfam |
EGF-like_Ca-bd_dom (IPR001881) - T[10-48] 7.9E-6 - T[50-93] 9.9E-11 - T[95-134] 4.8E-8 - T[136-176] 1.2E-5 - T[178-218] 9.1E-8 - T[220-259] 1.6E-9 - T[261-304] 2.4E-6 |
| ProSiteProfiles |
EGF-like_dom (IPR000742) - T[10-49] 9.535 - T[95-135] 9.839 - T[220-260] 9.803 |
| SMART |
EGF-like_dom (IPR000742) - T[13-49] 0.0011 - T[53-94] 31.0 - T[98-135] 3.5E-4 - T[139-177] 87.0 - T[181-219] 0.1 - T[223-260] 0.0027 |
| ProSitePatterns |
EGF-type_Asp/Asn_hydroxyl_site (IPR000152) - T[24-35] . - T[111-122] . - T[235-246] . |
| ProSitePatterns |
EGF-like_CS (IPR013032) - T[33-48] . - T[120-134] . - T[244-259] . |
| ProSitePatterns |
EGF_Ca-bd_CS (IPR018097) - T[50-76] . - T[136-161] . - T[261-288] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FBLN1_HUMAN | 34.725 % | 190 | 1.18E-53 |
| HMCN1_HUMAN | 43.346 % | 211 | 1.0E-59 |
| HMCN2_HUMAN | 33.83 % | 218 | 2.15E-62 |