Aniseed - Transcript Card

Transcript Model

Transcript Id

Moocci.CG.ELv1_2.S327208.g08626.01.t

Possible name(s)

IDH3A; IDH3B; IDH3G

Gene model

Moocci.CG.ELv1_2.S327208.g08626

Location

S327208 [4,677 / 6,626]

Sequences

Amino acid sequence

Length: 361

>Moocci.CG.ELv1_2.S327208.g08626.01.p
MSSKLFRFIKNSSAVRRFSTTVQKRQNQTCTLIPGDGIGPEISQAVVQIFEAADAPIDWE
ERSVTAIKGTGGKWMIPLPAQESINKNHVGLKGPLATPIAAGHPSMNLLLRKTFNLYANV
RPCISVKGFKTPYDDVNLITIRENTEGEYSGIEHVVIPGVVQSIKLITEIASRRVAHFAF
DFARKNNRKTVTVVHKANMQRMADGMFLKCCRETASEFRDIKFNEMNMGTVCLNMVQDPN
QFDVLVLPNLYGDILSDLCAGLVGGLGVTPSGNIGADGVALFEAVHGTAPDIAGKDLANP
TALLLSGVMMLRHLGLMSHAARIEKAAFDTINDVKTRTRDLGGEATCSEFTNEVCRRVRD
L

Nucleotide sequence

Length: 1,419

>Moocci.CG.ELv1_2.S327208.g08626.01.t
CTTTTATCAGAGTTGGTAATGGTTTTGTCTAAATCTAAAAAAATAGACGGGCTACTTCAT
GGGGTATTCTATATTTGCTAATTTAAAAAGTTCCGGATTTATTTTGTAGTTTAGACCTTT
ATCAGATATTAAATTTATTTAAATTAACAATGTCGTCAAAGCTATTTCGATTTATTAAGA
ATTCCTCTGCTGTACGACGGTTTTCAACAACAGTTCAAAAACGACAAAACCAAACTTGTA
CTTTGATACCTGGCGATGGAATTGGTCCGGAGATTTCACAAGCAGTTGTTCAAATATTTG
AAGCTGCTGATGCACCGATAGACTGGGAGGAGAGAAGTGTCACTGCCATTAAGGGTACGG
GAGGAAAATGGATGATCCCGCTGCCTGCTCAAGAATCTATTAACAAAAACCACGTGGGGT
TAAAAGGCCCCTTGGCTACACCAATTGCTGCCGGTCATCCATCCATGAATCTATTGCTTC
GAAAAACTTTTAATTTATATGCCAATGTACGGCCATGTATTTCAGTGAAGGGTTTTAAAA
CTCCATATGATGATGTCAACTTGATCACCATCCGGGAAAATACTGAAGGAGAATACTCTG
GGATAGAACATGTTGTCATTCCTGGTGTGGTTCAGAGCATTAAGCTCATAACAGAGATAG
CGTCAAGACGTGTGGCCCATTTTGCCTTCGATTTTGCTAGAAAAAATAACCGCAAGACTG
TAACCGTCGTGCACAAAGCAAACATGCAGCGAATGGCAGACGGAATGTTTTTAAAATGCT
GCCGTGAAACAGCCTCGGAGTTTCGTGACATCAAGTTCAACGAGATGAACATGGGTACAG
TCTGTCTGAACATGGTCCAGGATCCGAACCAGTTTGATGTTCTGGTTCTGCCAAATTTGT
ACGGAGATATTCTCAGCGATCTTTGTGCTGGACTGGTGGGGGGGCTTGGCGTAACCCCAA
GCGGAAATATTGGAGCTGATGGTGTCGCCCTTTTTGAAGCTGTACATGGAACAGCACCAG
ACATCGCTGGTAAAGATTTGGCGAATCCGACTGCGTTGTTACTTTCTGGTGTAATGATGC
TTCGCCATCTTGGCTTAATGTCGCATGCCGCACGCATTGAAAAGGCAGCTTTCGACACGA
TAAATGATGTTAAAACTCGAACCAGGGATCTGGGCGGGGAGGCAACATGCTCCGAATTCA
CCAACGAAGTTTGCCGACGTGTTAGAGATTTATAAAAAGTTTATTTATTGGTTATTTATT
GTTTGAAGTTCAATTTTTTTGTTTGTTTCATATTTAACGACTGCCACTGTTCAATCAGTC
TACAGCGCTTGTATTGGCTGCTGAGAAGTTCAATTATTTTGCTATTTTTTTCTATTTTTA
TTGCACAATAAATTCCCCACCAACCCTTGCAGTATAAAA

InterProScan

TIGRFAM	Isocitrate_DH_NAD (IPR004434) - T[26-358] 1.0E-146
SMART	IsoPropMal-DH-like_dom (IPR024084) - T[29-354] 3.2E-159
Pfam	IsoPropMal-DH-like_dom (IPR024084) - T[31-354] 1.7E-100
ProSitePatterns	IsoCit/isopropylmalate_DH_CS (IPR019818) - T[249-268] .

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
IDH3G_HUMAN	43.582 %	278	2.86E-91
IDH3B_HUMAN	42.073 %	269	1.29E-87
IDH3A_HUMAN	76.347 %	551	0