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  1. Transcript 'Harore.CG.MTP2014.S2...'
  2. Transcript 'Moocci.CG.ELv1_2.S34...'

Transcript Model

Transcript Id

Moocci.CG.ELv1_2.S341522.g09162.01.t

Possible name(s)

NDC1

Location

S341522 [11,512 / 16,534]

Sequences

Amino acid sequence

Length: 340

>Moocci.CG.ELv1_2.S341522.g09162.01.p
MYPELLRNSNLLNVELATLKPRLGTGVKYLAMQFLTSLCQRCEASRRHIYDLNQPGEGGK
ALRWNKVADACLEKINNFVTRLNEYQRHCTGSLSNKFGNHDSLSSSTSSNKSSVGEAVSP
VSMLRKRQPIDNDMSVFQSNTLDGSALMEASMMNSSMSAGHVPTPTLWTKQFVKSNITEI
QSSGLPNTTERQNAAFKKHPGKIARLVSKIKSLKIVSYFISPIPEYELKNLYCDYRLQQW
AIQSLSYLCAASVEEDRYGVVQPRLAEVISTLIELLNALERNSKATLVVSSGHNAIYFSL
RSEIKIGLYRIVDAFGESINCIKLPPEYRRRIQAFSLYKE

Nucleotide sequence

Length: 1,023

>Moocci.CG.ELv1_2.S341522.g09162.01.t
ATGTATCCTGAGCTATTGCGTAATAGCAATTTACTCAATGTTGAATTAGCCACGTTAAAA
CCTAGACTTGGCACTGGCGTCAAATACTTAGCAATGCAGTTTTTAACGTCCCTGTGCCAA
CGCTGTGAAGCATCCCGTCGTCATATTTACGATCTCAACCAACCAGGGGAAGGAGGCAAA
GCATTGCGTTGGAACAAAGTAGCTGATGCTTGCTTGGAGAAAATTAATAATTTTGTCACA
AGATTAAATGAATATCAAAGACACTGTACTGGATCTTTATCAAACAAGTTTGGGAACCAT
GATTCTTTATCATCTTCAACTTCATCAAACAAATCTTCTGTTGGTGAAGCAGTGTCACCG
GTTTCAATGCTTCGAAAACGCCAACCTATAGACAATGATATGTCAGTTTTTCAATCTAAC
ACATTGGATGGAAGTGCACTAATGGAGGCCAGTATGATGAACAGTAGCATGTCCGCTGGT
CATGTGCCAACACCAACTTTATGGACTAAACAATTTGTAAAGTCAAATATTACTGAAATT
CAAAGTTCTGGTTTGCCAAATACCACTGAGAGGCAGAACGCTGCTTTTAAGAAGCATCCT
GGAAAAATTGCAAGACTTGTGTCGAAAATCAAATCATTGAAAATCGTATCATATTTTATA
AGCCCAATCCCAGAATATGAACTGAAAAATTTGTATTGTGATTACCGACTTCAACAGTGG
GCTATCCAAAGCTTGTCATATCTCTGTGCTGCGAGTGTGGAGGAAGATAGATATGGTGTA
GTTCAACCCAGATTAGCTGAAGTTATTTCAACCTTGATTGAATTGCTAAATGCTCTCGAA
AGAAACAGTAAAGCTACATTAGTAGTAAGCAGTGGACATAATGCAATATATTTCTCATTG
AGATCCGAAATTAAAATTGGGCTTTATCGAATAGTGGATGCATTTGGAGAATCGATAAAC
TGCATTAAACTTCCTCCAGAATACAGAAGAAGAATTCAAGCTTTTTCACTTTACAAAGAG
TGA

InterProScan

PANTHER
Nucleoporin_prot_Ndc1/Nup (IPR019049) - T[27-340] 1.8E-49
Pfam
Nucleoporin_prot_Ndc1/Nup (IPR019049) - T[27-333] 8.7E-41

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
NDC1_HUMAN 25.485 % 114 5.39E-28





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