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  1. Clone 'ciad064g04'
  2. Clone 'cima878400'
  3. Clone 'cien181606'
  4. Molecular Tool 'pCi-Bra::Tbx6b'
  5. Transcript 'Moocci.CG.ELv1_2.S34...'

Transcript Model

Transcript Id

Moocci.CG.ELv1_2.S344395.g09257.01.t

Possible name(s)

ASCL5; FIGLA; SCX

Location

S344395 [17,579 / 19,965]

Sequences

Amino acid sequence

Length: 243

>Moocci.CG.ELv1_2.S344395.g09257.01.p
MIGQKQISFVALTESVNTSTLACSRIHYDAFTHAVMDNIGTRKMRDITNWIRIKEEQMNR
IRPYIESKNRESVLRRNERERDRIKHVNMAFDDLRKRVPSYGAKQRKISKMDTLQSAIEY
IKVLEQRIRGQSLASNILCESGRCCHSGKRSCEGSRLPHIIQTKGSEDRIQLTPCGTHNT
SLFVGSLYAQHGILSLPPHQPLYGSMVLDTLSEINVDEVKDVFSSCSQSHTSIFKSLRTE
DAE

Nucleotide sequence

Length: 732

>Moocci.CG.ELv1_2.S344395.g09257.01.t
ATGATTGGGCAAAAACAAATTAGCTTCGTTGCGCTTACTGAAAGTGTAAACACGAGTACG
CTAGCTTGTTCTAGAATTCACTACGATGCCTTCACTCACGCTGTAATGGATAATATCGGG
ACACGTAAAATGCGCGACATAACTAACTGGATCCGTATCAAAGAAGAACAAATGAACCGG
ATACGACCTTACATTGAATCGAAAAACCGTGAATCGGTTCTACGACGAAACGAGAGAGAA
AGGGATAGGATCAAACACGTCAATATGGCGTTCGATGATTTGAGAAAACGTGTTCCATCA
TATGGGGCAAAACAAAGGAAGATAAGTAAGATGGACACTTTGCAGTCAGCTATCGAATAT
ATAAAAGTGTTGGAACAAAGAATCCGTGGGCAATCTTTAGCTTCAAACATACTTTGTGAA
TCGGGCAGATGCTGTCATAGTGGAAAGCGGAGTTGCGAAGGATCGAGACTTCCTCACATT
ATCCAAACCAAAGGTTCCGAGGATCGAATTCAGCTGACACCTTGCGGTACACATAATACC
AGTTTATTTGTTGGTTCGTTATACGCACAACATGGCATCTTATCATTACCACCACACCAA
CCGTTATATGGCTCCATGGTTTTAGACACTCTTAGCGAAATAAACGTGGATGAAGTTAAA
GATGTTTTTTCCTCTTGTTCACAAAGTCATACTTCCATCTTTAAATCTTTGCGAACAGAA
GATGCGGAGTAA

InterProScan

PANTHER
MASH1/Ascl1a-like (IPR015660) - T[60-141] 9.1E-24
ProSiteProfiles
bHLH_dom (IPR011598) - T[71-124] 13.853
Gene3D
HLH_DNA-bd_sf (IPR036638) - T[74-129] 3.5E-18
CDD
bHLH_dom (IPR011598) - T[74-129] 2.6971E-12
SUPERFAMILY
HLH_DNA-bd_sf (IPR036638) - T[75-139] 6.8E-15
Pfam
bHLH_dom (IPR011598) - T[76-124] 2.7E-14
SMART
bHLH_dom (IPR011598) - T[77-130] 2.1E-12

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value





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