Aniseed - Transcript Card

Transcript Model

Transcript Id

Moocci.CG.ELv1_2.S347319.g09392.01.t

Possible name(s)

BRAP; USP44; USP49

Gene model

Moocci.CG.ELv1_2.S347319.g09392

Location

S347319 [36,082 / 40,208]

Sequences

Amino acid sequence

Length: 232

>Moocci.CG.ELv1_2.S347319.g09392.01.p
MQVSDDFPVIATNILCMLAVPADVDAHMILEFTASYCDVIKRLKIVRDRTPNQYMALLTF
TSDEMATKFFRNYNNKPFSSVLPDEKCRIAFVASIEALRTHGDRVASPVGLLPVPGTTEL
PDCTVCLERMDESVLGVLTILCNHSFHGSCLQKWEDLCCPVCRYVQTPEPRSENSCQECG
HVEDLWICLVCGNVGCGRYTMEHAQKHYSETHHNYAMALSDNRVWDYAGEPI

Nucleotide sequence

Length: 699

>Moocci.CG.ELv1_2.S347319.g09392.01.t
ATGCAAGTTAGCGACGATTTTCCAGTAATTGCAACCAATATATTATGCATGCTTGCGGTA
CCTGCAGATGTTGATGCGCACATGATCCTTGAATTCACCGCCTCCTACTGTGATGTCATA
AAAAGATTAAAAATTGTCCGAGATCGTACCCCCAACCAATATATGGCGTTATTAACATTT
ACTTCCGACGAAATGGCCACGAAGTTTTTCCGTAATTACAATAATAAACCTTTCAGCTCA
GTATTGCCTGATGAGAAATGCAGAATAGCATTTGTGGCATCAATTGAAGCATTACGAACG
CACGGAGATCGCGTTGCAAGCCCTGTTGGCTTGCTACCAGTGCCTGGCACCACAGAATTA
CCTGATTGTACAGTTTGTCTTGAAAGAATGGACGAGTCTGTACTTGGTGTTTTAACTATC
TTGTGCAATCATTCATTTCATGGATCATGCTTACAGAAATGGGAGGATTTATGCTGCCCT
GTGTGCCGATACGTTCAAACACCTGAGCCTCGTTCAGAGAACAGTTGCCAAGAATGCGGT
CATGTTGAGGATCTTTGGATTTGCCTCGTTTGCGGAAATGTGGGCTGTGGGCGATATACA
ATGGAACATGCACAGAAACATTACTCAGAAACCCATCACAATTATGCCATGGCACTTAGT
GATAACAGAGTATGGGATTACGCTGGTGAACCAATATAA

InterProScan

Pfam	BRAP2 (IPR011422) - T[11-99] 1.6E-23
SUPERFAMILY	RBD_domain_sf (IPR035979) - T[12-79] 6.36E-5
ProDom	BRAP2 (IPR011422) - T[12-96] 7.0E-15
Gene3D	Znf_RING/FYVE/PHD (IPR013083) - T[119-159] 2.0E-8 - T[160-231] 1.0E-20
Pfam	Znf_RING (IPR001841) - T[122-163] 5.0E-7
ProSiteProfiles	Znf_RING (IPR001841) - T[123-163] 12.784
SMART	Znf_RING (IPR001841) - T[123-162] 1.4E-5
ProSiteProfiles	Znf_UBP (IPR001607) - T[174-232] 16.594
SMART	Znf_UBP (IPR001607) - T[175-224] 6.1E-20
Pfam	Znf_UBP (IPR001607) - T[176-228] 1.8E-18

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
BRAP_HUMAN	52.252 %	255	7.68E-82