Aniseed - Transcript Card

Transcript Model

Transcript Id

Moocci.CG.ELv1_2.S353860.g09626.01.t

Possible name(s)

SERINC1; SERINC2; SERINC3

Gene model

Moocci.CG.ELv1_2.S353860.g09626

Location

S353860 [6,346 / 10,485]

Sequences

Amino acid sequence

Length: 322

>Moocci.CG.ELv1_2.S353860.g09626.01.p
MAIFFALLCVMMLNVKTSRDPRAKIHNGFWLFKFLILLGITIGVFFIPNNGFHVAVYYIG
MISGFAFILIQLVLLVDFAHNWNESWVDKKENSDSPRCWLGLLLGSCIFNYIVAIVAVVL
LFIFYAPSGCSLNQAFVSINLIMCVILSVVSILPKVQEVQPQSGLLQASVVSVYILYLTW
SAMTNEPGKTCNPSIVTIVENIIKPGSGSENTSAIATTAATTTDVDPWKANDIVSVIIFF
VCVLYSRPDSFSSVEKIKIAETCRNLINALQAAHIRSSNQENVQRLQISSDRVILENDVD
DGDSKAIQSDRYSVGYFNVYSR

Nucleotide sequence

Length: 969

>Moocci.CG.ELv1_2.S353860.g09626.01.t
ATGGCTATATTTTTCGCCTTGCTCTGTGTGATGATGCTTAATGTAAAAACTAGTCGTGAT
CCCAGAGCCAAAATCCATAATGGGTTTTGGTTGTTTAAGTTCCTAATTCTTCTTGGAATA
ACTATTGGTGTATTTTTTATTCCTAACAATGGATTCCATGTTGCTGTGTATTACATTGGA
ATGATCAGTGGATTTGCATTCATACTTATACAGCTTGTTCTGTTGGTTGATTTTGCTCAC
AACTGGAATGAATCATGGGTGGACAAAAAGGAGAATTCAGATTCACCACGATGCTGGCTT
GGTCTCTTGCTTGGAAGCTGCATATTTAATTACATTGTGGCCATTGTTGCAGTTGTATTG
CTGTTCATCTTTTATGCCCCATCTGGCTGTTCATTGAACCAAGCATTCGTGAGCATAAAC
TTGATCATGTGCGTTATATTATCAGTTGTTTCCATCCTTCCAAAAGTACAAGAAGTTCAA
CCTCAAAGTGGATTGTTACAAGCATCGGTCGTTAGCGTTTACATCTTGTACCTTACTTGG
TCTGCCATGACAAATGAACCAGGAAAGACCTGCAACCCTAGTATTGTTACTATTGTTGAG
AACATTATCAAACCTGGTTCTGGGTCGGAAAACACTTCAGCTATAGCAACAACAGCAGCA
ACTACAACTGATGTGGACCCATGGAAAGCCAATGACATCGTCAGCGTCATTATTTTCTTT
GTGTGTGTTCTTTACTCAAGACCAGACAGCTTCTCGTCAGTTGAGAAAATCAAAATTGCG
GAAACATGTCGCAATTTAATAAATGCTTTACAAGCTGCACACATCCGTTCATCAAACCAG
GAGAACGTGCAGCGACTTCAGATATCGTCTGACCGAGTTATTCTGGAAAATGACGTTGAT
GATGGTGACAGCAAGGCGATACAAAGCGACAGATACAGCGTAGGGTATTTTAATGTTTAT
AGTAGATAA

InterProScan

PANTHER	TDE1/TMS (IPR005016) - T[1-296] 2.7E-92
PANTHER	Tms1-like (IPR029559) - T[1-296] 2.7E-92
Pfam	TDE1/TMS (IPR005016) - T[1-316] 2.2E-94

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
SERC3_HUMAN	40.367 %	247	9.96E-79
SERC2_HUMAN	42.642 %	217	2.98E-67
SERC1_HUMAN	43.731 %	253	4.68E-81