Aniseed - Transcript Card

Transcript Model

Transcript Id

Moocci.CG.ELv1_2.S356276.g09702.02.t

Possible name(s)

KHDRBS2; KHDRBS3; QKI

Gene model

Moocci.CG.ELv1_2.S356276.g09702

Location

S356276 [21,317 / 31,636]

Sequences

Amino acid sequence

Length: 424

>Moocci.CG.ELv1_2.S356276.g09702.02.p
MNITGISSVPEFGYKMENAQMLQTAAALQATSPQSNSNSIMSLNGYTTVAQQQVVPSVST
STMSNNIGLQSQANLQNGTSPNIQLSLLASATTSLLQSLPNDSEADKQTKERCLYLQQLL
KEKKQCQLYPNIFMHADRLLDEEIVKIRSVLFQNGDKQPLELPTPTGSVMTLTEKVYVPV
KDHPEYNFVGRILGPRGLTAKQLEQETKCKIMVRGKGSMRDKKKEEMNRGKPNWEHLNDE
LHVLITVEDTENRARLKLQRAVDEVKKLLIPAEGEDDLKKRQLMELAIINGTYRDHSSSI
KGQPRIITGPAQMITGPALRSPPPGQPPLGMISSTPMVTRLPTGQTILSNQPTNQLFGHA
VADGGLYYTQLDYPYTHINPTGASLLEYSLADPNSLIGTPGAKLVRQRPDPRAHPYQRAP
ESGP

Nucleotide sequence

Length: 1,391

>Moocci.CG.ELv1_2.S356276.g09702.02.t
TCAGCAGTAATTTATTAGTTTAAGTAATTTAAAACTGCGTAGGTTAGTGTTAAGCTAAAG
CAAGGTTGGAAATTACACGCATGGAAAATTACCAAGCATAACATCAAGACACAACCACAA
TGAACATTACTGGCATATCTTCCGTGCCAGAATTCGGCTATAAAATGGAAAATGCCCAAA
TGCTTCAAACTGCAGCCGCGTTACAAGCAACTTCGCCACAGTCAAACTCGAACTCAATAA
TGTCCTTAAACGGGTATACAACTGTGGCACAGCAACAAGTTGTCCCTAGTGTTTCAACAT
CTACAATGTCAAACAACATCGGCCTACAATCACAAGCTAACCTACAAAATGGCACGTCAC
CAAATATACAACTAAGTCTTCTTGCTAGTGCCACAACGTCTTTGTTGCAATCACTTCCAA
ACGACTCAGAAGCAGACAAACAGACTAAAGAGAGATGTCTTTATTTGCAACAGTTATTGA
AAGAGAAAAAACAATGTCAGTTATACCCAAATATATTTATGCATGCCGACCGGTTACTTG
ATGAGGAAATCGTCAAGATTCGATCAGTTTTGTTTCAAAACGGAGATAAGCAACCTCTGG
AGCTTCCAACTCCTACCGGATCTGTGATGACTCTGACGGAAAAAGTTTACGTTCCTGTGA
AAGATCATCCCGAGTACAATTTCGTTGGACGAATTCTGGGACCTCGCGGTTTGACGGCGA
AACAATTGGAGCAAGAAACGAAGTGTAAGATTATGGTGAGGGGCAAAGGATCTATGCGTG
ATAAAAAGAAGGAGGAAATGAACAGAGGCAAACCAAACTGGGAACATCTGAATGATGAGC
TTCATGTATTAATAACAGTTGAAGACACAGAAAACCGAGCCAGACTTAAACTGCAGCGAG
CAGTTGATGAAGTTAAGAAACTTCTTATACCTGCGGAAGGAGAAGATGATCTAAAGAAAA
GACAGCTAATGGAGCTGGCCATTATTAATGGAACTTACAGAGATCATTCAAGCAGTATCA
AAGGACAACCACGAATTATCACTGGTCCTGCGCAAATGATAACTGGACCTGCCTTAAGGT
CACCACCGCCTGGACAACCACCACTAGGCATGATTTCATCTACTCCTATGGTTACCAGAT
TGCCTACTGGACAGACGATTTTGTCAAATCAACCAACTAATCAGTTATTTGGACATGCAG
TAGCAGACGGAGGTCTTTACTACACTCAACTTGATTATCCATACACCCACATTAATCCAA
CAGGGGCTTCTTTGTTAGAATATAGCTTAGCTGACCCTAACAGCCTTATAGGTACTCCAG
GCGCTAAGTTAGTTCGCCAACGACCAGATCCAAGGGCACACCCTTACCAAAGGGCGCCAG
AATCAGGTCCT

InterProScan

Pfam	STAR_dimer (IPR032377) - T[109-155] 7.3E-20
Gene3D	KH_dom_type_1_sf (IPR036612) - T[109-301] 1.1E-76
SMART	KH_dom (IPR004087) - T[170-270] 2.8E-9
SUPERFAMILY	KH_dom_type_1_sf (IPR036612) - T[172-294] 3.48E-32
Pfam	KH_dom_type_1 (IPR004088) - T[175-224] 7.4E-6

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
KHDR3_HUMAN	39.669 %	129	7.88E-34
KHDR2_HUMAN	42.391 %	137	5.98E-37
QKI_HUMAN	52.778 %	303	1.2E-100