- Transcript 'Moocci.CG.ELv1_2.S36...'
Transcript Model
Transcript Id
Moocci.CG.ELv1_2.S361885.g09985.01.t
Possible name(s)
HERC2; RCBTB1; RCBTB2
Gene model
Location
S361885 [5,420 / 7,091]
Amino acid sequence
Length: 556
>Moocci.CG.ELv1_2.S361885.g09985.01.p
MAENKFNSIPVSLQLNSRNALVMGNNKLSDLALWPILSLVPESIRTKIKLVYVFSQAASE
IIFTTLDNKIYGMGTNTSGCLGAGDTQGSLLPRCIESLNGKKIIDISAGSGPHVLVLTEE
GEVYSWGHNSYMQLGNGGSTPGLNPTPLSRNSWKVVEIACGSHHSMALTDNGEVYSWGYN
NCGQIGSGSTSNLASPRKVTATIGNKVISHIACGQTSSMAVTDNGEVYSWGYNGNGQLGV
GNNSNQTNPYKISALQNVVIIQIVCGYAHTLALTDDGIVYGWGANSYGQLGSGTKANTVN
PIQVASECGRVVLIAASHYSHSSAAQNQHGEVYMWGQLRMQSTAHPILTNFSNVDAVFLG
FSSPHVSWRPMIACHENEPTVEQSIALAFNDESTSDLKVLSDGKIIHVHKSILKIRCDYF
RRMFQSHWEENSQDKIEITGYSYNVVYAFLNWLYTDNVELPPEDALGLLDLATSYCENNL
KQQCEKLIKEGICVENSAVLLSAAIKYQALELQEYCFKYCMNHTSQVVLSKNFKSLNHED
MTYFIEECARRGAFKR
Nucleotide sequence
Length: 1,671
>Moocci.CG.ELv1_2.S361885.g09985.01.t
ATGGCGGAGAATAAATTCAATTCAATACCGGTTTCTTTACAGTTAAATTCGAGAAATGCT
TTAGTGATGGGAAATAATAAGCTTAGTGATCTGGCACTTTGGCCAATATTAAGTCTTGTA
CCTGAAAGCATAAGAACTAAAATAAAGTTAGTATATGTTTTCAGTCAAGCTGCTTCAGAA
ATCATATTTACAACTCTTGACAACAAAATTTATGGCATGGGCACAAACACAAGCGGTTGT
CTGGGTGCTGGAGATACACAAGGTTCATTATTACCACGTTGCATAGAAAGTTTAAATGGA
AAGAAGATTATTGATATATCCGCTGGAAGTGGACCCCATGTTTTAGTATTAACAGAGGAG
GGGGAAGTGTATAGTTGGGGTCATAATAGTTACATGCAACTGGGAAATGGAGGATCAACC
CCTGGATTAAATCCTACACCATTGTCACGAAACTCATGGAAAGTTGTAGAAATAGCTTGC
GGAAGTCATCATTCTATGGCATTAACTGATAACGGAGAAGTGTATTCATGGGGATACAAT
AATTGTGGGCAAATCGGTTCAGGTTCAACTTCCAACCTTGCTTCTCCACGAAAAGTTACA
GCCACAATAGGAAACAAAGTTATCAGTCACATTGCATGTGGACAGACTTCTTCAATGGCA
GTAACCGATAATGGTGAAGTGTATTCTTGGGGTTATAATGGTAATGGACAGCTTGGGGTT
GGAAATAACTCAAATCAAACAAATCCATACAAAATTTCCGCTTTGCAAAATGTTGTCATA
ATTCAGATAGTATGTGGATATGCTCATACATTGGCTCTAACTGATGATGGCATTGTGTAT
GGTTGGGGGGCAAATAGCTATGGACAGCTTGGATCTGGAACTAAAGCTAATACTGTGAAC
CCAATTCAAGTCGCTTCAGAATGCGGAAGAGTTGTTTTGATTGCAGCATCTCATTATTCC
CATTCATCCGCAGCTCAAAATCAGCATGGTGAGGTTTACATGTGGGGACAACTTCGTATG
CAATCTACAGCACATCCCATTCTGACAAATTTTTCTAATGTCGATGCTGTTTTTTTAGGA
TTTAGTTCACCTCATGTAAGCTGGAGACCAATGATTGCATGTCATGAAAATGAACCAACT
GTTGAACAAAGTATTGCACTGGCATTTAATGATGAGTCAACATCTGATCTTAAAGTTTTA
TCTGATGGAAAAATTATACATGTCCATAAATCAATTCTTAAAATAAGGTGTGATTATTTT
CGACGAATGTTTCAATCACACTGGGAAGAAAACTCACAAGACAAGATAGAAATTACTGGA
TACTCTTATAATGTTGTTTATGCTTTTCTCAACTGGCTTTACACAGATAATGTTGAGCTA
CCTCCCGAAGATGCTCTTGGTCTTCTTGATCTTGCAACTTCATACTGTGAAAACAACTTA
AAGCAACAATGTGAAAAACTGATTAAAGAAGGAATCTGTGTTGAAAACTCTGCTGTATTA
CTTTCCGCAGCTATCAAATATCAGGCGTTGGAACTACAAGAATATTGCTTTAAATATTGC
ATGAATCATACATCACAAGTTGTACTTTCAAAAAACTTTAAATCCTTAAACCACGAAGAC
ATGACTTATTTTATTGAAGAATGTGCTCGACGTGGTGCTTTTAAAAGATAA
| Gene3D |
RCC1/BLIP-II (IPR009091) - T[51-148] 2.0E-24 - T[149-363] 1.4E-64 |
| SUPERFAMILY |
RCC1/BLIP-II (IPR009091) - T[51-338] 4.36E-83 |
| Pfam |
Reg_chr_condens (IPR000408) - T[67-110] 1.2E-7 - T[224-273] 2.4E-14 - T[276-319] 2.7E-8 |
| ProSiteProfiles |
Reg_chr_condens (IPR000408) - T[68-119] 10.182 - T[121-171] 16.836 - T[172-224] 14.685 - T[225-276] 18.263 - T[277-328] 11.429 |
| PRINTS |
Reg_chr_condens (IPR000408) - T[122-138] 1.9E-14 - T[155-168] 1.9E-14 - T[174-190] 1.9E-14 - T[225-241] 1.9E-14 - T[263-279] 1.9E-14 - T[279-293] 1.9E-14 |
| ProSitePatterns |
Reg_chr_condens (IPR000408) - T[158-168] . |
| SUPERFAMILY |
SKP1/BTB/POZ_sf (IPR011333) - T[380-490] 2.2E-24 |
| Pfam |
BTB/POZ_dom (IPR000210) - T[389-490] 8.2E-21 |
| SMART |
BTB/POZ_dom (IPR000210) - T[395-492] 5.9E-21 |
| ProSiteProfiles |
BTB/POZ_dom (IPR000210) - T[395-462] 17.148 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| HERC2_HUMAN | 38.281 % | 162 | 3.3E-42 |
| RCBT2_HUMAN | 51.412 % | 574 | 0 |
| RCBT1_HUMAN | 54.34 % | 602 | 0 |