Aniseed - Transcript Card

Sequences

Amino acid sequence

Length: 1,043

>Moocci.CG.ELv1_2.S362864.g10052.01.p
MGYNNNLKSRRKSEIMAPVTIDKVPTTTKHIKGATISHMVKRLARVYVTDSQDINFLNVF
FTTYRTFSQASDVLNILLNEYEDLYLKPVENAAVLRSIVQVLKAWLERYFEEDFYQPPEH
TLLRQVLRIALKHDGTEDENCNVSSVIPDLKKFEYYESDFVLRRKNGIKTTFASYVSAKL
AVAERKSRSTEEMDSSMFIITPPPHFCDLDVTEEGSLLNLEAAKQLLVMQSGTVAEQLTL
IDAKLFMDVLPHHCLASVMSKKRPPSVQATKDQFNRVVYCVTGTVLCPGIKSSVRSKVIA
KWIDIAQECREMKNFSSLFAIVSCLKTYAIHRLKRAWLGVPHEHTHLLQELSSLNMKDLI
MKVGTAKFNTEDSNISRVRKDATLRRNQDINSGIMHGTVPYLGSFLTDLVHLDTALSNHL
EGGLINFEKRRKAFEVLAQLQLWQASCRSYQNIETDESFITWFNSITVLSDEQTYKLSEL
IEENVASTVNSPMKHHKENNRLQSSGSAASIMSHLRKSKDLESQGVGKLSHSFSGYSSPG
QQFRNVKVTVVQCKDSQQHAFDLPINALSNYKTIQINSNERTNAVIRKILTAFHIPCDHD
EIKKFSLVQIMPDADKEIRIPNSSNVYYAMNSTDFDPRFILLEEGAEIPEFKRSDTATLS
RKTHKKTHRKNNSISTIHTSAGITSTQSLGVRSVSTKSSASPMKSLYKQLAFSSVALASG
TYSPSEAAKKNSEISTFTPKDIDDKKKKRSSANVVLMSSTSRDDSEQYSPRRFSADADLS
AVVLPVQMMPMSMAYQQPQNDYVRNRCMSESSASRSAPCSPQNHRKSTTGVNKVETCEED
WNQTKSGYTWSMKRAFRKNLKSMPTQSQTKFYISDSLNDVSDINSTNATNVDRIEHNAVS
KTKFYIPILSPKLNKRKQKKMSKGHSKTLPPKFVPDFSKYADPPETNKRGAKVSENALMS
PTPSDCSTSSHISDSVFDEELRKPGYKNQYKKNTLPKNYSLTLPPKIRIQNPSPTKNDLS
KRQSISTDYSSDDSEASIEITLL

Nucleotide sequence

Length: 3,752

>Moocci.CG.ELv1_2.S362864.g10052.01.t
TAAAGCTGTGTTTATTTTCTTTAAGGATATTTATGCTGTAAGGCCTAAGTGTAGGAAGTA
TTTATTAAGAAAGACGTGTTGTTTTAATTAACAAAATATACTATTTGGAATATATAACAA
TAATATACATAAATGGGATATAACAATAATTTGAAGTCTCGTCGAAAGTCTGAAATAATG
GCTCCTGTCACAATCGACAAAGTCCCTACAACTACCAAACACATTAAAGGTGCAACAATA
AGCCACATGGTGAAGAGATTGGCGAGGGTTTATGTCACTGACAGTCAAGATATCAACTTT
CTTAACGTTTTCTTCACAACTTACAGAACATTTTCCCAAGCATCTGACGTATTAAATATT
TTATTAAACGAATATGAAGATCTATATTTAAAGCCCGTAGAAAATGCAGCAGTATTAAGG
TCTATTGTTCAAGTTTTAAAAGCATGGCTGGAAAGATATTTTGAAGAAGATTTTTACCAA
CCTCCTGAACATACACTACTTCGCCAAGTTTTAAGAATCGCATTAAAGCACGATGGTACT
GAAGACGAAAATTGTAACGTATCGTCAGTTATCCCTGACCTCAAGAAATTCGAATATTAC
GAATCGGATTTTGTTTTACGACGGAAAAACGGAATCAAAACAACATTCGCATCGTACGTT
TCCGCCAAACTTGCTGTAGCGGAGCGAAAAAGTCGATCGACTGAGGAAATGGATTCTTCA
ATGTTTATTATCACACCTCCTCCTCATTTTTGTGATCTTGATGTTACTGAAGAAGGGAGT
TTACTGAACTTGGAAGCTGCAAAGCAACTTCTTGTGATGCAGTCGGGAACTGTTGCTGAA
CAATTGACTCTTATTGACGCAAAACTTTTCATGGACGTCCTTCCCCATCACTGTCTGGCA
TCGGTGATGTCGAAAAAACGTCCCCCCAGTGTGCAAGCCACTAAAGACCAGTTTAACAGA
GTGGTTTATTGCGTTACAGGGACTGTGTTGTGTCCTGGAATAAAATCTTCAGTGAGGTCA
AAGGTTATTGCAAAGTGGATTGACATAGCACAGGAGTGTCGAGAAATGAAGAATTTTTCA
TCGTTATTTGCCATTGTATCCTGTTTAAAAACGTACGCTATCCACCGTTTAAAACGCGCC
TGGTTGGGCGTGCCTCATGAACATACTCATTTACTACAAGAACTGAGCAGTCTGAATATG
AAGGATCTTATAATGAAAGTAGGAACGGCAAAGTTTAACACAGAAGATAGCAACATAAGC
AGAGTCCGAAAAGACGCCACCTTGCGAAGGAATCAAGATATTAACTCCGGAATAATGCAC
GGAACAGTACCATATCTAGGATCATTTCTAACAGATTTAGTTCATTTAGACACTGCATTA
TCAAATCACTTAGAGGGTGGGTTAATTAATTTTGAGAAAAGACGAAAAGCCTTTGAAGTT
TTGGCGCAATTGCAGCTTTGGCAAGCATCATGTAGAAGTTACCAGAACATTGAAACAGAC
GAATCGTTCATCACTTGGTTTAACTCAATCACAGTTCTATCAGATGAACAAACGTACAAG
CTGTCAGAACTGATAGAAGAGAACGTTGCATCGACTGTAAACAGCCCTATGAAACACCAC
AAAGAAAACAATCGTCTGCAATCAAGTGGTAGCGCAGCAAGTATCATGTCTCATCTGAGG
AAATCAAAAGACTTGGAATCCCAGGGAGTTGGAAAGCTAAGTCATTCGTTCAGTGGATAC
TCGTCACCTGGCCAACAGTTTCGCAATGTAAAAGTGACCGTGGTTCAGTGTAAAGATTCT
CAACAACATGCGTTCGATTTACCGATAAACGCTCTTTCTAATTACAAAACGATACAGATT
AATTCTAATGAAAGAACGAACGCAGTCATCCGAAAAATACTAACAGCTTTTCATATTCCG
TGTGATCATGACGAAATTAAAAAGTTTTCATTAGTTCAAATCATGCCCGATGCAGATAAA
GAAATTCGAATACCAAATTCTTCTAACGTTTATTACGCAATGAATTCGACGGATTTTGAT
CCCAGATTTATTCTTTTGGAAGAAGGAGCTGAAATTCCAGAGTTTAAGCGGTCCGACACA
GCAACACTTTCTCGTAAAACTCACAAGAAAACGCACCGGAAAAATAACAGTATTTCAACG
ATTCATACGTCGGCCGGAATTACTTCAACACAGTCGCTGGGAGTTCGATCTGTCAGCACT
AAATCCAGTGCATCTCCCATGAAAAGTTTATATAAACAACTGGCATTTAGCTCTGTTGCG
CTGGCTAGCGGAACATATTCTCCCAGTGAAGCCGCAAAGAAAAATTCTGAAATTTCAACG
TTCACACCGAAAGATATTGATGACAAAAAGAAAAAGAGGTCATCAGCTAATGTTGTTCTT
ATGTCTTCAACTTCTAGAGATGATTCAGAGCAATATTCACCTCGCAGGTTTTCTGCAGAT
GCTGATCTTTCAGCTGTTGTATTACCCGTACAAATGATGCCTATGAGTATGGCGTATCAA
CAACCACAGAACGATTACGTGCGCAATCGCTGTATGTCTGAAAGTTCAGCTTCAAGGTCG
GCACCGTGCAGTCCACAGAATCACAGAAAATCAACAACTGGTGTTAATAAAGTGGAAACA
TGTGAGGAAGATTGGAATCAAACCAAAAGTGGATACACATGGTCAATGAAACGTGCTTTC
CGCAAAAATTTAAAATCTATGCCGACCCAATCCCAGACGAAGTTTTACATTAGCGACTCT
TTGAATGATGTCAGCGACATTAACTCAACCAATGCAACTAATGTTGATCGTATCGAACAT
AACGCCGTGTCAAAAACCAAGTTCTACATCCCGATATTGTCGCCAAAATTAAATAAGAGA
AAACAGAAGAAAATGTCAAAAGGTCACTCCAAAACCTTACCCCCAAAGTTTGTTCCTGAT
TTTTCAAAGTATGCAGATCCACCTGAAACAAATAAACGAGGTGCAAAAGTTTCAGAAAAT
GCACTCATGTCGCCCACACCTTCAGACTGTAGCACATCTAGCCACATATCAGACTCTGTG
TTTGATGAAGAGCTCAGAAAACCCGGATATAAAAATCAGTACAAAAAGAACACTTTGCCG
AAAAATTACTCACTCACATTACCTCCAAAGATTAGGATTCAAAATCCGTCACCTACTAAA
AACGATTTGTCAAAACGTCAATCCATTTCAACAGATTATTCTTCAGATGACTCCGAAGCC
TCCATAGAGATCACTTTATTGTAAATATTTTACATTTCTATGGTTCCTTACTTGTTTTGT
TGGCTATGAAGCTCTGTTTTAATATGATTGAAACAGAGTGGAGTCACCTGATATGTAGTT
CTTGCCAAATTAAAAACTTTCTTCATTGTTTTGTTCACAAATTAGTAAGTGCCTTTTGAT
TGCTTTCAATTTATCATTTAGACAAAAGTCGTTACTAGTTATTTCTTTCAAAAGTTTAAA
TAATAAACTTTGCACTGTTCAACGAAATTATCTTGAAGTAGGCTATTATCTGTAACTTTA
ATAATACTTTATTTGTAAATTTTGCCCAAGTATGTGGCCAATGGCCATTACTAATTCTCA
CCTCATTATCCAAGCGATATTTTAAACGTGTATTGCATTACTGTTACTTTTTTCCATGGC
AATATTTAATTATCTTCAGTTTTAATCATACTTTGTTTTCCATAGTGCAATAATAATATT
TTTATTAATAAAATTCAAAAAATCTTTAACAA

InterProScan

SMART	Ras-like_Gua-exchang_fac_N (IPR000651) - T[26-151] 8.2E-11
ProSiteProfiles	Ras-like_Gua-exchang_fac_N (IPR000651) - T[27-151] 22.817
SUPERFAMILY	Ras_GEF_dom_sf (IPR023578) - T[28-495] 1.7E-76
Pfam	Ras-like_Gua-exchang_fac_N (IPR000651) - T[31-123] 4.6E-11
CDD	Ras-like_Gua-exchang_fac_N (IPR000651) - T[50-127] 9.54613E-10
Gene3D	RASGEF_cat_dom_sf (IPR036964) - T[211-484] 1.1E-76
CDD	RASGEF_cat_dom (IPR001895) - T[226-478] 1.79749E-51
SMART	RASGEF_cat_dom (IPR001895) - T[226-485] 1.9E-60
ProSiteProfiles	RASGEF_cat_dom (IPR001895) - T[230-484] 44.424
Pfam	RASGEF_cat_dom (IPR001895) - T[234-431] 2.8E-42
ProSitePatterns	Ras_G-nucl-exch_fac_CS (IPR019804) - T[399-429] .
ProSiteProfiles	RA_dom (IPR000159) - T[542-646] 11.336
SUPERFAMILY	Ubiquitin-like_domsf (IPR029071) - T[563-633] 4.28E-12
Pfam	RA_dom (IPR000159) - T[566-643] 6.6E-9