- Transcript 'Moocci.CG.ELv1_2.S36...'
Transcript Model
Transcript Id
Moocci.CG.ELv1_2.S365436.g10199.01.t
Possible name(s)
TRIM3; TRIM33; TRIM45
Gene model
Location
S365436 [21,430 / 26,837]
Amino acid sequence
Length: 852
>Moocci.CG.ELv1_2.S365436.g10199.01.p
MQMSRRYNDKVKKTNTERDSRGSDTSLPNYVTSCTDSGVSSSDSLINGDKRASDGVVLDL
VKLTQKTLLHENDKSELKSDDDLLYYKIMESGKMEKNVKEEPNMSTEVIPRTSVFLTAMD
SQMNKAESDNDSNWADCTSVSTESLNIENEIHNTAYDPEIICQKCNEIYKDPRLLPCLHT
FCLRCLQHCTGISKNISNISLDQKNAGRNISEVHSPTSKVMHSTARSTVFLSSDRCDIEF
PTITCHVCNMSANVPSSGISGFPVNEMMRRQIVLNEMKDCSVRSLSCDLCCDVQSRPSPM
QGRCIQCSMNLCQFCIQAHKRQKPTASHLILDLEEIDENDKYSLSTDSIPMLCNKHPFEE
LKLYCSECNVLVCRDCCLCSEHFSHSHKCEFIKDVINEHVADIRNVYQKCESKISAVKEN
ISQLEETEKDIKTIASEVSKQVERHIDGYIRGLQDHKKKLLNTIQVSKRKKISAISEEYR
ALKNILNKTEYSCNFTTKLLGAGTEGDILSSKEYLMKNLQEVAKMRYRSTTDSGKGFIEF
YPKKKTKVWLESNTSDGSSNVLSQSIQPRLEVEIWGVVVSNIPHPNYCVAYGDGLKHAEV
KLPTEFFIHMKTEDQENLNHGGDNVSVRITPESTLCKRLPKVQVVDKLDGTYRVLYIVYS
PGMYNIEILVSQHPIKGSPFRVTANEISVNIPHTGIFHCCTFCSSGGSKTAICACGSRMP
GGYSGCGHGHSGHPGLPHWSCCGQTNESASCLSSLPLFPKLGLSSQPSYHTLPTKLHKAR
RHQKNLSNNMFPSSPTESEDFYGTPSTIKAQSNPYFNINNPYNSPTLESKSNNFKFAYSR
ALFPGLDIIAYT
Nucleotide sequence
Length: 2,691
>Moocci.CG.ELv1_2.S365436.g10199.01.t
GGTAAAACAGTAGTTCGTTGACAATTCATAATTGGATATGATCTATAATATTTTCAGTTG
GTCAAAGATCGTTTAAGCGTATAGTAGTAATCCTAATTAAATATTTCTTAAGACTAATGA
GTAGACGATATAATGCAAATGAGTAGACGATATAATGACAAAGTAAAAAAGACAAATACA
GAACGGGATTCACGTGGGAGCGATACAAGTTTGCCAAACTATGTGACTTCTTGTACAGAT
TCAGGAGTCTCTAGTTCAGATTCTTTGATAAATGGAGATAAACGAGCTTCTGATGGAGTA
GTTCTGGATTTGGTAAAACTAACACAGAAGACTTTGTTGCATGAGAATGATAAAAGTGAA
TTAAAAAGTGATGATGATTTGTTATACTACAAAATCATGGAATCTGGCAAAATGGAAAAG
AATGTAAAAGAAGAACCCAATATGTCAACGGAAGTTATACCAAGAACGTCTGTGTTTTTA
ACAGCAATGGATTCCCAAATGAATAAAGCTGAAAGTGACAATGACAGCAATTGGGCAGAT
TGTACATCAGTTTCTACAGAGAGTTTAAATATTGAAAATGAAATACACAATACAGCTTAT
GACCCTGAAATAATTTGCCAAAAATGCAACGAAATTTACAAAGATCCTCGATTATTGCCA
TGTCTCCATACTTTCTGTTTGAGATGCTTGCAACACTGCACTGGAATATCTAAAAATATT
TCAAATATTTCACTGGATCAAAAAAATGCAGGGAGAAATATAAGTGAAGTGCACTCACCT
ACCAGTAAAGTTATGCACTCGACTGCTAGGTCAACTGTGTTCCTTTCAAGCGATAGATGT
GACATTGAATTTCCAACAATCACTTGTCATGTTTGCAATATGTCTGCAAATGTTCCTAGT
AGTGGAATATCTGGTTTTCCTGTTAATGAAATGATGAGAAGACAAATAGTTTTAAATGAA
ATGAAGGACTGCTCAGTAAGATCACTTTCATGTGATTTATGTTGCGATGTTCAAAGTAGA
CCATCCCCAATGCAAGGGCGATGTATTCAATGTTCCATGAATCTATGCCAGTTCTGTATA
CAAGCTCATAAACGACAAAAACCAACTGCTTCTCACTTGATCCTTGACTTAGAAGAAATT
GATGAAAATGACAAATATTCCTTATCCACTGACAGTATTCCTATGTTATGCAATAAACAT
CCTTTTGAAGAATTAAAACTTTATTGTTCTGAGTGCAATGTTCTTGTGTGTCGTGATTGT
TGCTTGTGTTCCGAACATTTCAGTCATAGTCACAAATGTGAATTTATTAAAGATGTTATA
AATGAACATGTTGCTGATATTAGAAATGTTTATCAAAAATGTGAATCAAAAATCTCAGCG
GTAAAAGAAAATATTTCCCAATTAGAAGAAACAGAAAAAGATATAAAAACAATTGCAAGT
GAAGTTTCCAAACAAGTAGAAAGACACATTGATGGTTATATCAGAGGTTTACAAGATCAT
AAGAAGAAACTATTAAACACAATTCAAGTTTCTAAAAGAAAAAAGATCAGTGCAATATCT
GAAGAATATAGGGCCTTAAAAAATATACTGAATAAAACAGAATATTCATGCAACTTTACT
ACAAAATTACTTGGAGCTGGAACAGAGGGGGATATCTTATCATCAAAAGAATACCTAATG
AAGAACCTACAAGAAGTTGCGAAAATGCGATACAGGTCTACAACTGATTCAGGCAAGGGA
TTTATTGAGTTTTACCCAAAGAAAAAAACTAAAGTTTGGTTAGAATCAAATACAAGTGAT
GGAAGTTCCAATGTTTTGTCACAAAGCATTCAACCAAGATTGGAAGTTGAAATTTGGGGT
GTAGTAGTTTCTAATATTCCTCATCCCAATTACTGTGTTGCCTACGGTGATGGTTTAAAG
CATGCTGAAGTAAAACTTCCAACTGAATTTTTTATCCATATGAAAACAGAAGACCAAGAA
AATCTGAATCATGGTGGTGATAATGTATCTGTACGAATAACCCCAGAATCGACTTTGTGT
AAACGGTTGCCCAAAGTCCAAGTTGTGGATAAACTTGATGGAACTTATCGAGTTCTTTAT
ATTGTATATTCACCAGGAATGTACAATATAGAGATTTTAGTATCACAGCATCCAATCAAA
GGAAGTCCTTTCAGGGTTACTGCGAATGAAATTTCAGTGAACATTCCACACACTGGAATT
TTTCATTGTTGTACTTTTTGTTCTAGTGGTGGTAGCAAAACAGCTATATGTGCATGCGGC
TCAAGAATGCCCGGTGGATACTCTGGCTGTGGACATGGTCATAGCGGTCATCCTGGGCTT
CCACATTGGAGCTGCTGTGGTCAAACAAATGAATCTGCTTCTTGTCTGTCATCTTTGCCA
CTTTTTCCGAAACTAGGTTTAAGCAGTCAACCATCATATCATACCTTGCCAACAAAGCTT
CACAAGGCTCGGAGACACCAGAAAAATTTATCCAATAATATGTTCCCCTCATCCCCAACA
GAAAGTGAAGACTTCTATGGAACTCCATCTACAATTAAGGCGCAAAGCAATCCATATTTT
AATATCAACAATCCATATAACTCGCCAACTTTAGAATCAAAGTCAAATAATTTTAAATTT
GCCTACAGTCGTGCACTTTTTCCTGGCCTGGACATCATCGCTTATACTTAA
| SMART |
Znf_RING (IPR001841) - T[162-248] 0.0017 - T[287-368] 18.0 |
| Pfam |
Znf-RING_LisH (IPR027370) - T[162-195] 3.3E-7 |
| ProSitePatterns |
Znf_RING_CS (IPR017907) - T[177-186] . |
| ProSiteProfiles |
Znf_B-box (IPR000315) - T[348-392] 11.021 |
| CDD |
Znf_B-box (IPR000315) - T[352-386] 6.91654E-5 |
| SMART |
Bbox_C (IPR003649) - T[392-525] 8.1E-4 |
| ProSiteProfiles |
Filamin/ABP280_repeat-like (IPR017868) - T[580-684] 20.376 |
| SUPERFAMILY |
Ig_E-set (IPR014756) - T[583-684] 4.34E-21 |
| Gene3D |
Ig-like_fold (IPR013783) - T[583-688] 7.6E-22 |
| Pfam |
Filamin/ABP280_repeat-like (IPR017868) - T[584-681] 1.2E-17 |
| SMART |
Filamin/ABP280_rpt (IPR001298) - T[584-687] 4.7E-19 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TRIM3_HUMAN | 22.829 % | 102 | 3.35E-22 |
| TRI45_HUMAN | 32.318 % | 286 | 2.08E-86 |
| TRI33_HUMAN | 26.25 % | 97.4 | 1.63E-20 |