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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C6.43.v2.A...'
  2. Transcript 'Phmamm.CG.MTP2014.S1...'
  3. Transcript 'Moocci.CG.ELv1_2.S37...'

Transcript Model

Transcript Id

Moocci.CG.ELv1_2.S370431.g10399.01.t

Possible name(s)

PPIL4; SNRNP35; SNRNP70

Location

S370431 [56,202 / 59,288]

Sequences

Amino acid sequence

Length: 142

>Moocci.CG.ELv1_2.S370431.g10399.01.p
MYLTWEKDRDRAPYTGIGHLTHLFEDPKETPPPTRGETKAEKKKRRIKEKAVIRAKELEK
DIKNWDPNSNKNATTDAFRTLFVARINYDTSESKLRREFETYGPIRKIRMVHEQKSGKPR
GYAFIEFEHERDMHCKILRVVE

Nucleotide sequence

Length: 490

>Moocci.CG.ELv1_2.S370431.g10399.01.t
TATCGGTACTTCAAATTACATTAGCTCGAAAACTTATATAGCGCAATTAACAATATCCTC
ATTAATGTATCTCACATGGGAAAAAGATCGAGATCGTGCACCATACACTGGAATAGGACA
TCTAACTCACCTGTTTGAAGATCCCAAAGAAACCCCGCCTCCAACTAGGGGAGAAACGAA
AGCTGAAAAAAAGAAAAGACGAATCAAAGAAAAGGCAGTAATACGTGCTAAAGAATTGGA
AAAAGATATTAAAAACTGGGACCCAAATAGCAACAAAAACGCGACAACAGATGCATTTAG
AACATTGTTTGTTGCCAGAATTAACTATGATACATCGGAATCAAAGTTACGAAGAGAATT
TGAAACATATGGACCAATAAGAAAGATTCGAATGGTTCATGAACAAAAAAGCGGAAAACC
GAGGGGTTATGCTTTTATTGAATTTGAACACGAAAGGGATATGCACTGTAAGATATTAAG
AGTTGTTGAA

InterProScan

Pfam
U1snRNP70_N (IPR022023) - T[7-70] 4.5E-11
Gene3D
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[34-138] 4.7E-20
SUPERFAMILY
RBD_domain_sf (IPR035979) - T[67-133] 3.26E-18
ProSiteProfiles
RRM_dom (IPR000504) - T[79-142] 14.556
SMART
RRM_dom (IPR000504) - T[80-141] 9.8E-9
Pfam
RRM_dom (IPR000504) - T[81-133] 4.2E-14

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RU17_HUMAN 60.976 % 147 2.83E-43