- Transcript 'KH2012:KH.C1.1049.v2...' >
- Transcript 'Phmamm.CG.MTP2014.S4...' >
- Transcript 'Boleac.CG.SB_v3.S678...' >
- Transcript 'KH2012:KH.C6.263.v1....' >
- Transcript 'Moocci.CG.ELv1_2.S37...'
Transcript Model
Transcript Id
Moocci.CG.ELv1_2.S370431.g10399.01.t
Possible name(s)
PPIL4; SNRNP35; SNRNP70
Gene model
Location
S370431 [56,202 / 59,288]
Amino acid sequence
Length: 142
>Moocci.CG.ELv1_2.S370431.g10399.01.p
MYLTWEKDRDRAPYTGIGHLTHLFEDPKETPPPTRGETKAEKKKRRIKEKAVIRAKELEK
DIKNWDPNSNKNATTDAFRTLFVARINYDTSESKLRREFETYGPIRKIRMVHEQKSGKPR
GYAFIEFEHERDMHCKILRVVE
Nucleotide sequence
Length: 490
>Moocci.CG.ELv1_2.S370431.g10399.01.t
TATCGGTACTTCAAATTACATTAGCTCGAAAACTTATATAGCGCAATTAACAATATCCTC
ATTAATGTATCTCACATGGGAAAAAGATCGAGATCGTGCACCATACACTGGAATAGGACA
TCTAACTCACCTGTTTGAAGATCCCAAAGAAACCCCGCCTCCAACTAGGGGAGAAACGAA
AGCTGAAAAAAAGAAAAGACGAATCAAAGAAAAGGCAGTAATACGTGCTAAAGAATTGGA
AAAAGATATTAAAAACTGGGACCCAAATAGCAACAAAAACGCGACAACAGATGCATTTAG
AACATTGTTTGTTGCCAGAATTAACTATGATACATCGGAATCAAAGTTACGAAGAGAATT
TGAAACATATGGACCAATAAGAAAGATTCGAATGGTTCATGAACAAAAAAGCGGAAAACC
GAGGGGTTATGCTTTTATTGAATTTGAACACGAAAGGGATATGCACTGTAAGATATTAAG
AGTTGTTGAA
| Pfam |
U1snRNP70_N (IPR022023) - T[7-70] 4.5E-11 |
| Gene3D |
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[34-138] 4.7E-20 |
| SUPERFAMILY |
RBD_domain_sf (IPR035979) - T[67-133] 3.26E-18 |
| ProSiteProfiles |
RRM_dom (IPR000504) - T[79-142] 14.556 |
| SMART |
RRM_dom (IPR000504) - T[80-141] 9.8E-9 |
| Pfam |
RRM_dom (IPR000504) - T[81-133] 4.2E-14 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RU17_HUMAN | 60.976 % | 147 | 2.83E-43 |