- Transcript 'KH2012:KH.C3.466.v1....' >
- Clone 'cima889765' >
- Transcript 'Phmamm.CG.MTP2014.S1...' >
- Transcript 'Harore.CG.MTP2014.S1...' >
- Transcript 'Moocci.CG.ELv1_2.S37...'
Transcript Model
Transcript Id
Moocci.CG.ELv1_2.S370431.g10399.02.t
Possible name(s)
PPIL4; SNRNP35; SNRNP70
Gene model
Location
S370431 [56,202 / 63,821]
Amino acid sequence
Length: 426
>Moocci.CG.ELv1_2.S370431.g10399.02.p
MYLTWEKDRDRAPYTGIGHLTHLFEDPKETPPPTRGETKAEKKKRRIKEKAVIRAKELEK
DIKNWDPNSNKNATTDAFRTLFVARINYDTSESKLRREFETYGPIRKIRMVHEQKSGKPR
GYAFIEFEHERDMHFLKMLKPKCKLAAAYKSADGKKIDKRRVIVDVERGRTVKGWRPRRL
GGGMGGTRRAANEEVKRDHDDSRHRERDRERPRSKERERDRKKRSKSRERERTRDKDRDR
DRKRDRGDKERSDRDKDRDRDRKRDRDRGEKTTDTNDEGRSKDRDRDRDRDRKHRHRDRS
RERDGKRERKRSREKDRSDRDKDRSSRSNRDKSKSENESQKNKEMENNSEENAIKMETND
ANQSYNNTDNYDRSNENNDHYEQGGGDGYAYNNGDGKMQDMKAENMDYKSEENNIKQEEY
GSYENY
Nucleotide sequence
Length: 1,985
>Moocci.CG.ELv1_2.S370431.g10399.02.t
TATCGGTACTTCAAATTACATTAGCTCGAAAACTTATATAGCGCAATTAACAATATCCTC
ATTAATGTATCTCACATGGGAAAAAGATCGAGATCGTGCACCATACACTGGAATAGGACA
TCTAACTCACCTGTTTGAAGATCCCAAAGAAACCCCGCCTCCAACTAGGGGAGAAACGAA
AGCTGAAAAAAAGAAAAGACGAATCAAAGAAAAGGCAGTAATACGTGCTAAAGAATTGGA
AAAAGATATTAAAAACTGGGACCCAAATAGCAACAAAAACGCGACAACAGATGCATTTAG
AACATTGTTTGTTGCCAGAATTAACTATGATACATCGGAATCAAAGTTACGAAGAGAATT
TGAAACATATGGACCAATAAGAAAGATTCGAATGGTTCATGAACAAAAAAGCGGAAAACC
GAGGGGTTATGCTTTTATTGAATTTGAACACGAAAGGGATATGCACTTTTTAAAAATGTT
AAAGCCTAAATGTAAACTAGCAGCTGCTTATAAAAGTGCGGATGGAAAAAAAATTGACAA
AAGAAGAGTAATAGTGGATGTTGAGAGGGGAAGAACTGTGAAGGGATGGAGGCCACGTAG
ACTGGGAGGTGGAATGGGAGGAACAAGGAGAGCCGCTAACGAAGAGGTTAAAAGAGACCA
TGATGATAGCCGACATCGGGAACGAGATAGAGAACGTCCAAGGAGTAAAGAACGAGAGAG
AGATAGAAAAAAACGATCAAAATCGAGAGAGCGTGAACGCACAAGAGACAAAGACCGAGA
TCGTGATCGCAAACGAGATAGAGGAGATAAAGAACGATCTGATAGAGACAAGGATCGCGA
TAGAGACCGAAAACGAGACAGAGATCGCGGGGAGAAAACAACCGATACAAACGATGAAGG
TCGAAGTAAAGACAGAGATAGAGACCGTGATCGTGATCGAAAACATCGCCATAGAGACAG
ATCGCGAGAGCGTGATGGTAAACGTGAAAGAAAACGCAGCAGAGAAAAAGACAGAAGTGA
CCGCGATAAAGATCGTAGCAGCCGATCAAATCGTGACAAGAGTAAATCTGAAAACGAGTC
ACAAAAAAATAAGGAAATGGAAAATAATTCCGAAGAAAATGCTATTAAAATGGAAACTAA
TGATGCAAATCAATCATATAATAACACTGATAATTATGACAGAAGCAATGAAAATAATGA
TCATTATGAGCAAGGAGGTGGAGATGGATATGCCTATAATAATGGTGATGGAAAAATGCA
AGACATGAAAGCAGAAAATATGGACTATAAGAGTGAGGAAAATAATATAAAACAAGAAGA
GTATGGATCATATGAAAACTACTGAAAACCCTGCCTTAAATCAACTATTCTCAAAGTCTA
CATCATTTGATTGTGTGTATAACTGTAGTATACTGTAGAGTTCAGTGTACCATTAATTTT
TTACATCTTGTAATACAGTTTTCCACAAAAGTAGTATTCTGGTGATAATACTCGCAATTT
TATTTTTTAAATTAAATTTTGTTGCGTTGTTTTACTACCACAAATTAACTTAATCGTTGA
CTTAATTTTAAAACATTTTGCCCTTATATATTATTTCATTTTTACTTAGTAAATAAAAGA
ACTATAAAAATTCAATTACTAGTGTAATACTTGGTGTAAATTGGTTGATATATTCAATTT
ATTGTAGTATCCAGTCAAATTCACATAAAACTTTTTATTACTCTTGTGTCACCTTTAATT
ACCTAATAAAGTGAAAGTCTGAGCAGTGAATATATGAGTCCGAATACTTATATTGGGTAA
TATATTAAAAAAAACTTAGAAACGAACCATAACAATATTGTACCCTAATCAAAATACCGT
AACATTGGGTAAATATTTGGCCAAATGACCTAATTCTAAAGTTTTAAGGTCACAACACCT
AATTTTCTAAAATTTAGTTTGGGATTATATGTTTGCTGTGCTTACTTACTTCAAGAATAA
ATGAA
| Pfam |
U1snRNP70_N (IPR022023) - T[7-70] 3.6E-10 |
| Gene3D |
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[66-204] 1.4E-31 |
| SUPERFAMILY |
RBD_domain_sf (IPR035979) - T[67-189] 6.52E-22 |
| CDD |
snRNP70_RRM (IPR034143) - T[78-180] 1.40649E-50 |
| ProSiteProfiles |
RRM_dom (IPR000504) - T[79-169] 15.971 |
| SMART |
RRM_dom (IPR000504) - T[80-165] 1.4E-14 |
| Pfam |
RRM_dom (IPR000504) - T[81-133] 2.4E-13 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RU17_HUMAN | 61.35 % | 195 | 7.37E-58 |
| U1SBP_HUMAN | 35.484 % | 93.2 | 1.24E-21 |