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  1. Transcript 'Haaura.CG.MTP2014.S1...'
  2. Clone 'cilv073a05'
  3. Transcript 'Cisavi.CG.ENS81.R247...'
  4. Transcript 'Boschl.CG.Botznik201...'
  5. Transcript 'Moocci.CG.ELv1_2.S37...'

Transcript Model

Transcript Id

Moocci.CG.ELv1_2.S370431.g10399.02.t

Possible name(s)

PPIL4; SNRNP35; SNRNP70

Location

S370431 [56,202 / 63,821]

Sequences

Amino acid sequence

Length: 426

>Moocci.CG.ELv1_2.S370431.g10399.02.p
MYLTWEKDRDRAPYTGIGHLTHLFEDPKETPPPTRGETKAEKKKRRIKEKAVIRAKELEK
DIKNWDPNSNKNATTDAFRTLFVARINYDTSESKLRREFETYGPIRKIRMVHEQKSGKPR
GYAFIEFEHERDMHFLKMLKPKCKLAAAYKSADGKKIDKRRVIVDVERGRTVKGWRPRRL
GGGMGGTRRAANEEVKRDHDDSRHRERDRERPRSKERERDRKKRSKSRERERTRDKDRDR
DRKRDRGDKERSDRDKDRDRDRKRDRDRGEKTTDTNDEGRSKDRDRDRDRDRKHRHRDRS
RERDGKRERKRSREKDRSDRDKDRSSRSNRDKSKSENESQKNKEMENNSEENAIKMETND
ANQSYNNTDNYDRSNENNDHYEQGGGDGYAYNNGDGKMQDMKAENMDYKSEENNIKQEEY
GSYENY

Nucleotide sequence

Length: 1,985

>Moocci.CG.ELv1_2.S370431.g10399.02.t
TATCGGTACTTCAAATTACATTAGCTCGAAAACTTATATAGCGCAATTAACAATATCCTC
ATTAATGTATCTCACATGGGAAAAAGATCGAGATCGTGCACCATACACTGGAATAGGACA
TCTAACTCACCTGTTTGAAGATCCCAAAGAAACCCCGCCTCCAACTAGGGGAGAAACGAA
AGCTGAAAAAAAGAAAAGACGAATCAAAGAAAAGGCAGTAATACGTGCTAAAGAATTGGA
AAAAGATATTAAAAACTGGGACCCAAATAGCAACAAAAACGCGACAACAGATGCATTTAG
AACATTGTTTGTTGCCAGAATTAACTATGATACATCGGAATCAAAGTTACGAAGAGAATT
TGAAACATATGGACCAATAAGAAAGATTCGAATGGTTCATGAACAAAAAAGCGGAAAACC
GAGGGGTTATGCTTTTATTGAATTTGAACACGAAAGGGATATGCACTTTTTAAAAATGTT
AAAGCCTAAATGTAAACTAGCAGCTGCTTATAAAAGTGCGGATGGAAAAAAAATTGACAA
AAGAAGAGTAATAGTGGATGTTGAGAGGGGAAGAACTGTGAAGGGATGGAGGCCACGTAG
ACTGGGAGGTGGAATGGGAGGAACAAGGAGAGCCGCTAACGAAGAGGTTAAAAGAGACCA
TGATGATAGCCGACATCGGGAACGAGATAGAGAACGTCCAAGGAGTAAAGAACGAGAGAG
AGATAGAAAAAAACGATCAAAATCGAGAGAGCGTGAACGCACAAGAGACAAAGACCGAGA
TCGTGATCGCAAACGAGATAGAGGAGATAAAGAACGATCTGATAGAGACAAGGATCGCGA
TAGAGACCGAAAACGAGACAGAGATCGCGGGGAGAAAACAACCGATACAAACGATGAAGG
TCGAAGTAAAGACAGAGATAGAGACCGTGATCGTGATCGAAAACATCGCCATAGAGACAG
ATCGCGAGAGCGTGATGGTAAACGTGAAAGAAAACGCAGCAGAGAAAAAGACAGAAGTGA
CCGCGATAAAGATCGTAGCAGCCGATCAAATCGTGACAAGAGTAAATCTGAAAACGAGTC
ACAAAAAAATAAGGAAATGGAAAATAATTCCGAAGAAAATGCTATTAAAATGGAAACTAA
TGATGCAAATCAATCATATAATAACACTGATAATTATGACAGAAGCAATGAAAATAATGA
TCATTATGAGCAAGGAGGTGGAGATGGATATGCCTATAATAATGGTGATGGAAAAATGCA
AGACATGAAAGCAGAAAATATGGACTATAAGAGTGAGGAAAATAATATAAAACAAGAAGA
GTATGGATCATATGAAAACTACTGAAAACCCTGCCTTAAATCAACTATTCTCAAAGTCTA
CATCATTTGATTGTGTGTATAACTGTAGTATACTGTAGAGTTCAGTGTACCATTAATTTT
TTACATCTTGTAATACAGTTTTCCACAAAAGTAGTATTCTGGTGATAATACTCGCAATTT
TATTTTTTAAATTAAATTTTGTTGCGTTGTTTTACTACCACAAATTAACTTAATCGTTGA
CTTAATTTTAAAACATTTTGCCCTTATATATTATTTCATTTTTACTTAGTAAATAAAAGA
ACTATAAAAATTCAATTACTAGTGTAATACTTGGTGTAAATTGGTTGATATATTCAATTT
ATTGTAGTATCCAGTCAAATTCACATAAAACTTTTTATTACTCTTGTGTCACCTTTAATT
ACCTAATAAAGTGAAAGTCTGAGCAGTGAATATATGAGTCCGAATACTTATATTGGGTAA
TATATTAAAAAAAACTTAGAAACGAACCATAACAATATTGTACCCTAATCAAAATACCGT
AACATTGGGTAAATATTTGGCCAAATGACCTAATTCTAAAGTTTTAAGGTCACAACACCT
AATTTTCTAAAATTTAGTTTGGGATTATATGTTTGCTGTGCTTACTTACTTCAAGAATAA
ATGAA

InterProScan

Pfam
U1snRNP70_N (IPR022023) - T[7-70] 3.6E-10
Gene3D
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[66-204] 1.4E-31
SUPERFAMILY
RBD_domain_sf (IPR035979) - T[67-189] 6.52E-22
CDD
snRNP70_RRM (IPR034143) - T[78-180] 1.40649E-50
ProSiteProfiles
RRM_dom (IPR000504) - T[79-169] 15.971
SMART
RRM_dom (IPR000504) - T[80-165] 1.4E-14
Pfam
RRM_dom (IPR000504) - T[81-133] 2.4E-13

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RU17_HUMAN 61.35 % 195 7.37E-58
U1SBP_HUMAN 35.484 % 93.2 1.24E-21





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