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- Transcript 'Moocci.CG.ELv1_2.S37...'
Transcript Model
Transcript Id
Moocci.CG.ELv1_2.S373195.g10560.01.t
Possible name(s)
ZIC3; ZIC4; ZIC5
Gene model
Location
S373195 [17,384 / 18,050]
Amino acid sequence
Length: 221
>Moocci.CG.ELv1_2.S373195.g10560.01.p
MNHASEQYYDPNEVNQCTGFVHPHMEVSPTLNVQEPSILTCKWKGKKSDDPCGKQFYSIP
ETVEHLTLDHVGGHDQTDYTCYWEDCDRNCKPFQAKYKLVNHIRVHTGEKPFICPHFGCG
KVFARSENLKIHTRIHTGEKPFLCKFPGCQRRFGNSSDRKKHSYTHETEKPYVCKVPGCG
KSYSHPSSMRKHEKSHKETLLTNNVSFQFSENCATTFKQIY
Nucleotide sequence
Length: 666
>Moocci.CG.ELv1_2.S373195.g10560.01.t
ATGAATCACGCATCTGAACAATATTACGATCCCAATGAAGTAAATCAATGCACTGGTTTT
GTACATCCCCACATGGAAGTTTCACCAACGTTGAATGTCCAAGAACCGTCTATTTTAACC
TGTAAATGGAAAGGAAAGAAAAGTGATGATCCTTGCGGAAAACAGTTTTATTCCATTCCG
GAAACCGTTGAACATTTAACATTGGATCACGTCGGTGGACACGACCAAACCGATTATACT
TGTTACTGGGAAGATTGTGATAGAAATTGCAAACCGTTTCAAGCTAAGTACAAGCTAGTG
AACCATATTCGAGTTCATACTGGTGAAAAACCATTTATTTGTCCCCATTTTGGATGCGGA
AAAGTTTTTGCTCGAAGCGAAAATCTTAAAATCCACACAAGAATTCATACTGGAGAGAAA
CCGTTCTTGTGTAAATTCCCTGGATGCCAGCGAAGATTTGGTAACAGTTCGGACCGTAAA
AAACACAGTTACACCCACGAAACAGAAAAACCGTATGTTTGTAAAGTACCAGGCTGTGGT
AAATCTTACTCTCACCCTAGCTCAATGAGAAAACATGAAAAATCGCACAAGGAAACACTT
TTGACAAATAATGTATCTTTTCAATTTTCTGAAAATTGTGCAACTACTTTTAAGCAAATT
TACTAG
| SMART |
Znf_C2H2_type (IPR013087) - T[39-70] 180.0 - T[79-106] 6.0 - T[112-136] 2.8E-4 - T[142-166] 0.26 - T[172-196] 2.4E-4 |
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[84-111] 10.928 - T[112-141] 16.269 - T[142-171] 11.531 - T[172-196] 10.97 |
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[93-149] 5.8E-19 - T[157-197] 8.49E-11 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[114-136] . - T[144-166] . - T[174-196] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ZIC4_HUMAN | 63.415 % | 219 | 3.29E-71 |
| ZIC3_HUMAN | 62.048 % | 212 | 8.45E-67 |
| ZIC5_HUMAN | 67.808 % | 218 | 2.85E-67 |