- Transcript 'Phfumi.CG.MTP2014.S3...' >
- Transcript 'Moocci.CG.ELv1_2.S52...' >
- Transcript 'Boleac.CG.SB_v3.S83....' >
- Transcript 'Moocci.CG.ELv1_2.S57...' >
- Transcript 'Moocci.CG.ELv1_2.S39...'
Transcript Model
Transcript Id
Moocci.CG.ELv1_2.S390195.g11333.01.t
Possible name(s)
ZIC3; ZIC4; ZIC5
Gene model
Location
S390195 [3,490 / 4,333]
Amino acid sequence
Length: 281
>Moocci.CG.ELv1_2.S390195.g11333.01.p
MASMTYPNQPLYEYSNSYQGQNENFGQNYTGYVPYHNHIDNALHQNVLMPLQQNGQNFTT
PQYDYQTYQNPAMYHTPEQYYYPNEVNQCTGFVHPHMEVSPTLNVQEPSILTCKWKGKKS
DDPCGKRFYSIPEIVEHLTVDHVGGHDQTDHTCYWEDCDRNCKSFQAKYKLVNHIRVHTG
EKPFICPHFGCGKVFARSENLKIHTRIHTGEKPFLCKFPGCQRRFGNSSDRKKHSYTHKT
GKPYVCKVPGCGKSYSHPSSMRKHEKSHKETSTKETSLTNN
Nucleotide sequence
Length: 843
>Moocci.CG.ELv1_2.S390195.g11333.01.t
ATGGCTTCTATGACTTACCCAAATCAACCTTTGTATGAATACAGTAATAGCTATCAAGGA
CAAAATGAAAATTTTGGTCAAAATTACACTGGGTATGTGCCATATCACAACCACATTGAC
AATGCATTGCACCAGAATGTATTAATGCCTCTACAACAAAATGGACAGAATTTTACCACA
CCTCAATATGATTACCAGACGTATCAAAATCCTGCAATGTATCACACACCCGAGCAATAT
TACTATCCAAATGAAGTAAATCAATGCACTGGTTTTGTACATCCCCACATGGAAGTTTCA
CCAACGTTGAATGTCCAAGAACCGTCTATTTTAACCTGTAAATGGAAAGGAAAAAAAAGT
GATGATCCTTGCGGAAAACGGTTTTATTCCATTCCTGAAATCGTTGAACATTTGACAGTG
GATCATGTCGGTGGACACGACCAAACCGATCATACTTGTTACTGGGAAGATTGTGATAGA
AATTGCAAATCGTTTCAAGCTAAGTACAAGCTAGTGAACCATATTCGAGTTCATACTGGT
GAAAAACCATTTATTTGTCCCCATTTTGGATGCGGAAAAGTTTTTGCTCGAAGCGAAAAT
CTTAAAATCCACACAAGAATTCATACTGGAGAGAAACCGTTCTTGTGTAAATTCCCTGGA
TGCCAACGAAGATTTGGCAACAGTTCGGATCGGAAAAAGCACAGTTACACTCACAAAACT
GGAAAACCGTACGTTTGTAAAGTACCGGGCTGTGGTAAATCTTACTCTCACCCTAGCTCA
ATGAGAAAACATGAAAAATCGCACAAAGAAACATCTACTAAAGAAACATCTTTGACAAAT
AAT
| SMART |
Znf_C2H2_type (IPR013087) - T[111-142] 36.0 - T[151-178] 6.2 - T[184-208] 2.8E-4 - T[214-238] 0.26 - T[244-268] 2.4E-4 |
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[156-183] 11.406 - T[184-213] 16.269 - T[214-243] 10.471 - T[244-273] 11.261 |
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[164-221] 7.37E-19 - T[208-264] 1.04E-9 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[186-208] . - T[216-238] . - T[246-268] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ZIC4_HUMAN | 65.217 % | 223 | 1.66E-71 |
| ZIC3_HUMAN | 60.694 % | 219 | 1.54E-68 |
| ZIC5_HUMAN | 68.493 % | 220 | 2.82E-67 |