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TRANSCRIPT CARD

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  1. Transcript 'Phmamm.CG.MTP2014.S1...' > 
  2. EST 'AHC0AAA223YC21_RM1' > 
  3. Transcript 'Phfumi.CG.MTP2014.S6...' > 
  4. Transcript 'Haaura.CG.MTP2014.S1...' > 
  5. Transcript 'Moocci.CG.ELv1_2.S39...'

Transcript Model

Transcript Id

Moocci.CG.ELv1_2.S391234.g11386.01.t

Possible name(s)

EXOSC1

Gene model

Moocci.CG.ELv1_2.S391234.g11386

Location

S391234 [7,457 / 10,918]

Sequences

Amino acid sequence

Length: 196

>Moocci.CG.ELv1_2.S391234.g11386.01.p
MEDLALESERIGSEEDYQSGKGTHVRHGYIYSSIAGLICKENSKSKNATPVISIKSRHSH
QNLPQIGSIVTCKVTTITTRFAKCAIQGVNNVPLLEPFRGMISREDVRAKEIDKVEIYKS
FRPGDIVLAKVLSLGDASCYLLTTAEDELGVVVAHSEAGNQMIPISWQEMQCPVSYAKEY
RKVARPQREFLEVPER

Nucleotide sequence

Length: 1,255

>Moocci.CG.ELv1_2.S391234.g11386.01.t
ATGGAAGATCTCGCGCTTGAAAGTGAAAGGATTGGAAGTGAAGAGGATTATCAATCTGGT
AAAGGGACACATGTTCGACATGGTTATATTTATAGCTCAATTGCTGGTTTAATTTGTAAG
GAAAACTCCAAATCAAAAAATGCAACACCTGTCATTTCAATTAAGTCGAGACATTCTCAC
CAGAATTTACCGCAGATTGGATCCATTGTTACATGCAAGGTGACTACTATCACTACTCGT
TTTGCTAAATGTGCCATACAAGGTGTTAACAATGTGCCCCTTCTTGAACCTTTTCGTGGA
ATGATTTCAAGGGAAGATGTTAGAGCTAAAGAAATTGACAAAGTTGAAATTTACAAAAGT
TTTAGACCTGGAGATATTGTGCTAGCTAAAGTTTTGTCACTTGGGGATGCATCATGCTAT
CTTTTAACTACAGCTGAAGATGAATTAGGAGTGGTTGTAGCACATAGTGAAGCTGGTAAT
CAGATGATTCCAATAAGTTGGCAAGAAATGCAATGCCCTGTTTCATATGCTAAAGAGTAT
AGAAAAGTTGCAAGACCCCAGAGGGAGTTTCTTGAAGTTCCGGAAAGATAATACATAAAA
CGGGTACAAATACAAAATTTAACATACCAGTAGTTATAACATGAAATTTTAATGACATCT
ACAGTAAAATATACCTAAATGCTAAATTTGTCATGGATGACACATAATAAGAAATAGCGG
TATTGAAATGACACATTTTATTAAATATAGGTCGAAGTCGATGAATGATTCAGGCTAATG
ACTATGTCTTCATGACATCTTTTGGAAATGGTGGAAGAAGAAAATCTGATTGACCAATGT
CAAAATCTGGTCTACATTCTTCAATAAATTTTGTAAACTGAGACCGCAATTCTTTTAATT
TTTCAACATAAAAATCTCTATCATTAGTCATGTTTTGTAAATCTGAAAGTGTATTGGAAT
GTTTTTGTATTGATTCTTGTATCCTCTCTTTTAAAGCTGCAATTTGCATGTCATAATTTT
CTTCCACCTAAATTTTAGTGTAAACAGTCATTGGACTGCCTATTAGTAACCCTAAATTAA
ATGACTCCTAAAATGGGGAACATTTGGCAAAACTTAAATTTATTAAAGTATATAGTAATT
AATAATCTAAAAAAAACTTAACATTTCTTCAATCTTCATAACAAAAAAGTTACTAAACCA
ATTTTAATAAAAATATGGATGCCTGGAGAGTTTAATTTCAAAATACCGGTAAAGT

InterProScan

Pfam
Exosome_cplx_N_dom (IPR025721) - T[9-37] 1.9E-9
SUPERFAMILY
NA-bd_OB-fold (IPR012340) - T[62-183] 6.29E-36
Pfam
EXOSC1 (IPR019495) - T[96-134] 9.3E-9

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
EXOS1_HUMAN 61.17 % 224 2.85E-75