- Transcript 'Moocci.CG.ELv1_2.S41...'
Transcript Model
Transcript Id
Moocci.CG.ELv1_2.S413272.g12398.01.t
Possible name(s)
ALX4; VSX1; VSX2
Gene model
Location
S413272 [23,247 / 25,523]
Amino acid sequence
Length: 344
>Moocci.CG.ELv1_2.S413272.g12398.01.p
MTWISTNSIRNLVLKTMETLKQENLKKEFKKDADDNSWKNKFSIEHILKSSSATTKKIEV
NNNCINLKMENVKFEKKQNELEFLKSVKNLNKFSFENSEILEENKFQDDGNQISPKFPNN
CNTENWKIKLRKENPWLFYQPYRRLNETYENFFYQLNASVQKIEKQERPEFLNLENLNKS
ENQTQQEVVDSVKLTPKSKTDCTKANNLKTLKLEISNRLKKRRNRAAFNEEQIKALEDAF
EAAHYPDIVAREKLSLSTGIEESRIQVWFQNRRAKWRKTTNDWGHSSVMAEYGLYGAMVR
HSIPLPNSVIKSKHKLKNPSFAPWLIEMHKRSAETTDTDTSAST
Nucleotide sequence
Length: 1,079
>Moocci.CG.ELv1_2.S413272.g12398.01.t
ATGACATGGATATCGACCAATAGCATACGTAATCTCGTTTTAAAAACTATGGAAACTTTA
AAACAGGAAAACCTTAAAAAAGAATTCAAAAAAGATGCGGATGATAATAGCTGGAAAAAT
AAGTTTAGCATTGAACATATTTTGAAGTCGTCATCTGCAACTACAAAAAAAATAGAAGTT
AATAATAATTGCATAAACTTAAAAATGGAAAATGTCAAATTTGAAAAGAAACAAAACGAG
TTAGAGTTTTTGAAATCGGTGAAAAATTTAAACAAGTTTTCCTTTGAAAATTCGGAAATT
TTAGAAGAAAATAAATTTCAAGATGACGGCAACCAAATAAGTCCAAAGTTTCCTAACAAT
TGTAATACTGAAAACTGGAAAATTAAACTTCGCAAAGAAAATCCGTGGTTGTTTTATCAA
CCTTATCGTCGTTTGAATGAAACTTACGAAAACTTTTTTTACCAACTAAATGCAAGTGTT
CAGAAAATTGAAAAACAAGAAAGACCGGAGTTTTTAAACCTAGAAAATTTGAATAAAAGT
GAGAATCAAACTCAACAAGAAGTCGTTGATTCCGTAAAATTGACCCCAAAATCAAAAACA
GATTGCACAAAAGCGAACAATCTAAAAACACTAAAATTGGAAATTTCAAATCGCCTGAAA
AAACGAAGGAACAGAGCGGCATTTAATGAAGAACAAATAAAGGCATTGGAAGACGCTTTT
GAAGCAGCTCACTATCCGGACATTGTCGCCAGAGAGAAACTTTCATTATCAACCGGCATT
GAAGAAAGCCGCATACAAGTGTGGTTTCAAAACAGACGTGCAAAATGGAGAAAAACAACT
AATGATTGGGGTCACAGTAGTGTTATGGCTGAATATGGTTTATATGGAGCCATGGTGCGG
CACTCCATTCCCTTGCCAAATAGTGTAATTAAATCAAAACATAAGCTCAAGAATCCATCA
TTTGCGCCTTGGTTAATAGAAATGCATAAACGGTCAGCGGAAACGACTGATACAGACACA
TCCGCTTCGACTTGATTTTTTATGCGGCCTTCACTTTGTTAGCTTTTGTTTTACTTGTT
| SUPERFAMILY |
Homeobox-like_sf (IPR009057) - T[216-281] 8.13E-23 |
| ProSiteProfiles |
Homeobox_dom (IPR001356) - T[219-279] 18.933 |
| SMART |
Homeobox_dom (IPR001356) - T[221-283] 3.3E-22 |
| Pfam |
Homeobox_dom (IPR001356) - T[222-278] 6.7E-21 |
| CDD |
Homeobox_dom (IPR001356) - T[222-279] 3.18272E-16 |
| ProSitePatterns |
Homeobox_CS (IPR017970) - T[254-277] . |
| ProSiteProfiles |
CVC (IPR023339) - T[281-334] 18.546 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ALX4_HUMAN | 58.73 % | 87.8 | 3.01E-19 |
| VSX1_HUMAN | 61.207 % | 154 | 5.47E-44 |
| VSX2_HUMAN | 62.385 % | 148 | 1.4E-41 |