- Transcript 'Phfumi.CG.MTP2014.S1...' >
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- Transcript 'Moocci.CG.ELv1_2.S41...'
Transcript Model
Transcript Id
Moocci.CG.ELv1_2.S415308.g12504.01.t
Possible name(s)
KATNB1; TAF5; TAF5L
Gene model
Location
S415308 [100,738 / 106,817]
Amino acid sequence
Length: 210
>Moocci.CG.ELv1_2.S415308.g12504.01.p
MYFATSSLDRTARLWSLDRTFPLRIFAGHSSSVGCVSFHGNCMYLATADNRTIRLWDIAS
GKTVRLMTGHWASVLCLAFSPNGKYLASSGEDRKIRMWDIASGALIKEMRGHSSSVLSLD
FSPDDSMLASCGLDGCLRVWNTRTSLATPTRNNTDVDDPDLNPDLIARWRFDKGDVLHNV
TFQSCNILNCVNHLSDLRIWNSDARAQLNK
Nucleotide sequence
Length: 667
>Moocci.CG.ELv1_2.S415308.g12504.01.t
TACCGATTTTATTTTGTTTATTTACAGCGCTTTAAGCATGTACTTTGCAACATCCTCTCT
TGACCGTACAGCTCGTCTGTGGTCACTAGACCGTACTTTTCCGCTCCGGATATTCGCAGG
TCATTCTTCAAGTGTAGGTTGTGTTAGTTTTCATGGTAACTGCATGTACCTAGCAACCGC
AGATAATCGGACAATCAGGTTGTGGGACATTGCAAGTGGTAAAACTGTGCGATTGATGAC
AGGACACTGGGCCTCAGTACTCTGTCTTGCGTTCTCACCCAATGGCAAATACCTGGCATC
GTCTGGGGAAGACAGAAAGATAAGAATGTGGGATATTGCATCTGGTGCCCTAATCAAGGA
AATGCGAGGACACAGTAGCAGTGTCCTATCACTTGATTTTAGTCCTGACGATAGCATGCT
AGCCTCATGCGGATTGGACGGTTGTTTGCGTGTATGGAACACAAGGACCTCCCTGGCCAC
ACCTACTCGAAACAATACAGATGTAGATGACCCAGACTTAAACCCTGACCTTATTGCTCG
CTGGCGTTTTGACAAGGGTGATGTCTTACACAATGTGACGTTTCAAAGCTGCAATATTCT
TAACTGTGTCAACCACCTATCAGATCTGCGGATATGGAACAGTGATGCTAGAGCACAGTT
GAATAAA
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[1-53] 7.0E-13 - T[54-165] 6.4E-35 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[1-150] 41.684 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[2-200] 1.94E-46 |
| PRINTS |
G-protein_beta_WD-40_rep (IPR020472) - T[3-17] 1.2E-5 - T[86-100] 1.2E-5 - T[128-142] 1.2E-5 |
| SMART |
WD40_repeat (IPR001680) - T[19-57] 2.5E-6 - T[60-99] 7.8E-9 - T[102-141] 2.6E-11 |
| Pfam |
WD40_repeat (IPR001680) - T[22-57] 6.0E-7 - T[62-99] 1.5E-10 - T[105-141] 6.5E-9 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[26-66] 12.146 - T[67-108] 17.326 - T[109-150] 15.822 |
| ProSitePatterns |
WD40_repeat_CS (IPR019775) - T[86-100] . - T[128-142] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| KTNB1_HUMAN | 35.385 % | 97.1 | 1.87E-23 |
| TAF5_HUMAN | 46.099 % | 149 | 1.29E-41 |
| TAF5L_HUMAN | 48.677 % | 192 | 2.59E-58 |