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  1. Transcript 'Moocci.CG.ELv1_2.S42...'

Transcript Model

Transcript Id

Moocci.CG.ELv1_2.S424201.g12957.01.t

Possible name(s)

GPSM2; RAPSN; TTC28

Location

S424201 [11,940 / 15,402]

Sequences

Amino acid sequence

Length: 194

>Moocci.CG.ELv1_2.S424201.g12957.01.p
MGNSGSPRLRTKIQLHVAEAYRKTGKLQEAMECSEEAMKMAIDNDDRGLQAQCILCFADI
HRVKKNPERALPRYDNAAMLMTEIGDRYGEVRVFTGRAKCLVKLKEYHKALKLYEEGLKS
AINIGAKMLELQINGELAVLHQRMDNHKIAREITVKYHQLLDELQLFCGACANPIGETQE
QLEALPCSHVFHLK

Nucleotide sequence

Length: 585

>Moocci.CG.ELv1_2.S424201.g12957.01.t
ATGGGCAACTCCGGATCGCCTCGATTACGCACTAAAATCCAACTCCACGTGGCTGAAGCT
TATAGGAAAACTGGAAAGTTGCAAGAAGCAATGGAGTGTAGTGAAGAAGCAATGAAGATG
GCAATCGACAATGACGACAGGGGATTGCAAGCTCAGTGTATCCTATGTTTCGCCGACATC
CACAGAGTCAAGAAGAATCCTGAGCGTGCACTACCGAGGTACGACAATGCAGCGATGCTG
ATGACGGAAATCGGAGATAGATATGGGGAGGTTCGCGTCTTTACGGGAAGAGCAAAGTGT
CTCGTGAAACTAAAGGAGTACCATAAAGCTTTGAAGCTTTATGAAGAAGGGTTGAAATCT
GCAATCAACATTGGAGCAAAGATGCTTGAGCTTCAAATCAACGGGGAGTTGGCAGTTTTG
CATCAAAGAATGGACAACCACAAGATAGCGCGAGAGATCACAGTCAAATATCACCAACTT
TTGGACGAATTGCAGCTGTTCTGTGGAGCGTGCGCCAATCCAATTGGTGAAACACAAGAA
CAACTGGAGGCGTTACCTTGCTCCCACGTCTTTCATCTAAAGTAA

InterProScan

Gene3D
TPR-like_helical_dom_sf (IPR011990) - T[5-170] 2.1E-22
SUPERFAMILY
TPR-like_helical_dom_sf (IPR011990) - T[9-163] 6.2E-20
SMART
TPR_repeat (IPR019734) - T[11-44] 8.7 - T[91-124] 0.52
ProSiteProfiles
TPR_repeat (IPR019734) - T[11-44] 8.231 - T[91-124] 6.254
ProSiteProfiles
TPR-contain_dom (IPR013026) - T[11-124] 9.631

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RAPSN_HUMAN 43.523 % 168 1.01E-50





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