- Transcript 'KH2012:KH.C4.420.v1....' >
- Transcript 'KH2012:KH.L55.3.v1.A...' >
- Transcript 'KH2012:KH.C1.546.v4....' >
- Transcript 'Moocci.CG.ELv1_2.S63...' >
- Transcript 'Moocci.CG.ELv1_2.S42...'
Transcript Model
Transcript Id
Moocci.CG.ELv1_2.S427109.g13145.01.t
Possible name(s)
KDM2A; KDM2B; PHF8
Gene model
Location
S427109 [37,884 / 45,554]
Amino acid sequence
Length: 966
>Moocci.CG.ELv1_2.S427109.g13145.01.p
MFDRLYNLKDTALKCKKKFVRVLDNVLQIQCQKSLKFQKIKSKNKIRNKTNSGRLKVTSV
VPTYWDMAAMQTVTRNLRHKTVKVYDDDDEVEDEIDGKRTFNVLEKVNDMTKYNADFALE
MDSKAFTFEYVQQHGLENPIRFTESEGLGLKMPDRETFSVSDIRSLVGGRRTVDVMECVT
QKELEMSMRDFAQYFEGEARDRLYNVISLEFSHTRLEPLVERPKVVDQMDWIDLAWPPHL
KYEQSDQTNKMEEMKYPKVQKYCLMSVKGCYTDFHIDFGGTSVWYHILRGGKCFWLIPPT
NKNLELYERWTMSGRQGDIFFGDVVEKSQKIDLKQGDSLMIPSGWIHAVYTPLDSIVFGG
NFLHSFNIPMQLRISQIEERLHIPSKFRFPYFSEVLWYVLERYVYALTNKTFLTKEFQEK
SLKIEESAEENGTKPLSVVHLTPLEYKGIQRLLQKMEDFSVSKKFVPAGIRDPEKLLKTC
KQMLWQHSADDADLAITGKAIPGWPQPMMHKKGVKRPRAPNSAAITPKRPANSPRIRRIR
CKVCEACMRTECGQCTYCKDMKKFGGPGTMKQTCILRRCTNPILPGQTAEKPPPSVASTL
EKEEITLYSVEEQDENVDSTNATSSSLAKQTIKKEFKQSYRGKSYGKDKANQPKISILRI
PEDELFKYTIRPMTSCDPEESNNELLTFTDEQTCGAIACHATWFHVFHFLKKSDLAVCMR
VCKLFLKWASSPIFWENIDLSDCILTTETLRCISRRTPVSLNLERTNLSFEQLAWIIAKN
TFLRNLKLGFNSWSAISALNSASCPLLHSLDLSWVNGFNDPNLAHLLSVPTDGKPSQQVV
SSRLKFCKYFNLTGTDITDAGVRLVCVKLPNIFHINISYCDITDDSIRALVQSSFSKASP
ELREIIAKCCPNLTNKALAHSKEFASLNVIDLTDCSQVTEVKCKEFVMKQPDLYLQSQRH
IRRYIP
Nucleotide sequence
Length: 3,082
>Moocci.CG.ELv1_2.S427109.g13145.01.t
ATGTTCGATCGTTTATATAATCTGAAAGATACGGCATTGAAATGTAAAAAAAAATTTGTG
CGGGTGTTAGATAATGTTTTGCAAATTCAGTGTCAGAAAAGTTTAAAGTTTCAAAAGATC
AAAAGCAAAAATAAAATTAGAAATAAAACAAACTCTGGTCGTCTGAAAGTTACCAGTGTT
GTACCAACATACTGGGATATGGCTGCAATGCAAACAGTTACACGTAACCTCCGACACAAG
ACTGTAAAAGTTTATGATGACGATGATGAGGTCGAAGATGAAATTGATGGAAAAAGAACG
TTTAACGTCCTCGAAAAAGTCAACGACATGACTAAATACAATGCTGACTTCGCATTGGAG
ATGGACTCAAAAGCCTTCACGTTTGAGTACGTTCAACAGCACGGATTAGAAAACCCAATC
AGGTTTACGGAGAGTGAGGGGTTGGGGTTAAAAATGCCAGACAGGGAAACGTTTTCTGTG
TCTGACATTCGATCTCTGGTCGGCGGCCGACGAACGGTTGATGTGATGGAATGCGTCACA
CAGAAAGAACTTGAAATGTCAATGCGAGATTTCGCTCAGTATTTCGAGGGGGAAGCGAGA
GATCGTTTGTACAATGTGATTTCGCTGGAGTTTTCACACACAAGGCTGGAGCCGTTGGTT
GAAAGACCGAAAGTTGTTGACCAAATGGACTGGATTGATCTGGCGTGGCCGCCCCATCTG
AAGTACGAGCAAAGTGATCAAACTAATAAAATGGAAGAAATGAAATACCCCAAGGTTCAA
AAGTATTGCCTGATGTCGGTAAAGGGATGCTACACGGACTTTCACATCGACTTTGGCGGA
ACGTCGGTTTGGTATCACATTTTGAGAGGGGGGAAATGTTTCTGGCTTATCCCCCCGACC
AACAAAAACCTCGAGCTGTATGAGCGATGGACAATGTCGGGGCGACAGGGGGATATTTTC
TTCGGGGATGTTGTTGAAAAAAGCCAAAAAATTGACTTAAAACAGGGAGACTCTTTAATG
ATCCCCAGTGGGTGGATCCATGCAGTTTACACCCCCCTTGACTCGATCGTATTTGGAGGA
AACTTTTTGCATTCTTTTAATATACCTATGCAGTTAAGGATATCACAAATAGAAGAGAGG
CTTCACATCCCATCAAAGTTTCGGTTTCCATATTTTTCTGAAGTTCTGTGGTACGTTTTG
GAGCGCTATGTGTACGCTTTGACCAATAAGACGTTTTTAACGAAAGAATTCCAAGAGAAA
TCTTTAAAAATTGAAGAATCAGCTGAAGAGAATGGAACAAAACCCCTTTCAGTTGTGCAC
CTGACGCCATTGGAATACAAAGGGATCCAGCGCCTCCTGCAGAAGATGGAGGACTTCTCT
GTCTCAAAGAAGTTCGTCCCCGCCGGGATTCGCGACCCAGAAAAGCTGCTCAAAACATGC
AAGCAGATGCTGTGGCAGCACTCGGCTGACGATGCTGATCTAGCGATTACAGGGAAAGCG
ATCCCTGGGTGGCCCCAACCCATGATGCATAAAAAGGGGGTAAAAAGACCGCGAGCCCCA
AATAGCGCCGCTATAACGCCAAAGCGACCTGCAAATTCTCCTCGTATTCGAAGGATTCGA
TGCAAAGTGTGTGAGGCTTGCATGAGAACAGAGTGTGGACAATGCACATACTGCAAAGAC
ATGAAGAAGTTTGGCGGACCAGGCACAATGAAGCAGACCTGCATACTTAGAAGATGCACC
AACCCCATACTACCGGGACAGACGGCTGAAAAACCTCCCCCTAGCGTCGCCAGTACTCTA
GAAAAGGAGGAGATTACTCTCTACTCTGTCGAGGAGCAGGATGAAAACGTGGACTCCACT
AACGCAACGTCATCGAGCCTCGCCAAGCAAACCATCAAAAAAGAGTTTAAACAGAGCTAT
CGGGGCAAAAGTTACGGAAAGGACAAGGCGAACCAACCAAAGATTTCGATATTGCGGATT
CCTGAAGATGAATTGTTCAAGTACACGATTCGACCAATGACGTCATGTGATCCAGAAGAA
TCAAATAACGAACTTCTCACGTTCACGGACGAACAAACGTGCGGAGCGATTGCATGCCAT
GCCACCTGGTTTCATGTGTTTCATTTTTTGAAGAAATCCGATTTAGCTGTTTGTATGAGA
GTCTGTAAACTGTTTTTAAAATGGGCCTCAAGTCCAATTTTCTGGGAGAATATTGATTTA
TCAGACTGTATATTAACAACAGAAACTTTAAGATGTATTTCTCGCAGAACACCGGTTAGT
TTGAATTTAGAGAGAACAAATTTGTCGTTTGAACAGCTAGCTTGGATTATTGCCAAAAAT
ACTTTCCTCAGAAACTTGAAACTTGGATTCAATTCTTGGTCAGCTATTAGTGCTTTGAAC
TCTGCCTCCTGCCCACTATTACACTCACTAGATTTGTCGTGGGTGAATGGGTTTAACGAC
CCGAACCTCGCACATTTGCTCTCAGTCCCGACAGATGGCAAGCCTAGTCAGCAAGTTGTC
AGCTCAAGGTTAAAGTTCTGTAAATATTTTAATCTAACCGGAACTGACATCACAGATGCT
GGAGTGAGATTGGTCTGCGTGAAACTCCCCAACATTTTCCACATCAATATCAGCTACTGT
GACATTACAGATGACTCTATCCGTGCTCTCGTCCAATCATCTTTCTCGAAAGCTTCCCCA
GAATTGCGTGAAATTATTGCAAAATGCTGCCCAAATTTGACTAACAAAGCCCTCGCTCAT
TCAAAAGAATTTGCGAGTTTAAACGTGATTGATCTCACGGACTGCTCTCAAGTCACGGAG
GTTAAATGTAAAGAATTTGTAATGAAGCAACCAGATCTTTACTTGCAATCACAGCGGCAT
ATTCGCCGCTACATACCGTAAATCTAAGCTGTTACTGCTAATTATTCAGGTGTACAACGT
ATGTAGGTACATATGTTCAATATTCGTTGATTTATTTTAATTTCATGTATATTCTAACCA
ACTTCATATGTAGTATAGATAGATAGGTACACAAAGTTTTTATTTGTTCGTATTCCAATA
AAAGTATTTGTAACATAACAAA
| ProSiteProfiles |
JmjC_dom (IPR003347) - T[211-379] 28.598 |
| SMART |
JmjC_dom (IPR003347) - T[211-379] 2.7E-32 |
| ProSiteProfiles |
Znf_CXXC (IPR002857) - T[534-580] 13.327 |
| Pfam |
Znf_CXXC (IPR002857) - T[535-579] 3.4E-15 |
| Pfam |
F-box_dom (IPR001810) - T[657-739] 5.9E-4 |
| Gene3D |
LRR_dom_sf (IPR032675) - T[700-958] 2.5E-31 |
| SMART |
Leu-rich_rpt_Cys-con_subtyp (IPR006553) - T[804-829] 330.0 - T[869-893] 1.3 - T[899-924] 77.0 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| KDM2A_HUMAN | 55.181 % | 466 | 4.64E-147 |
| KDM2B_HUMAN | 60 % | 440 | 7.87E-136 |
| PHF8_HUMAN | 47.81 % | 283 | 1.04E-80 |