Aniseed - Transcript Card

Transcript Model

Transcript Id

Moocci.CG.ELv1_2.S431526.g13341.01.t

Possible name(s)

RPL4

Gene model

Moocci.CG.ELv1_2.S431526.g13341

Location

S431526 [4,207 / 6,080]

Sequences

Amino acid sequence

Length: 364

>Moocci.CG.ELv1_2.S431526.g13341.01.p
MACSRPLVSVYSDNGTPSGNSVTLPAVFKSPIRPDIVNFVHTNVVKNKRQPYAVNRKAGE
QTSAESWGTGRAVARIPRVRGGGTHRSGQAAFGNMCRGGRMFNPTKTHRRWHRKCNVQQR
RLAMCSALAASALPSLIMAKGHKIEQIPEVPLVVEDKVQEYKKTKEAVMLLKKLKVWDDI
KKVIKSKRMRAGRGKMRNRRRTMRRGPCVIYSQDDGIVRAFRNIPGITLLNVQRLNLLNV
APGGHVGRFLIWTESAVKELDKLYGTWRRPSQLKKNFNLPMPKMTCTDLTKIMKSDELRA
VLRPKLAKPRRRTQKKNPLKNVRVMLRLNPASVSFRRAALLTEARRAKEKAQKKAEKAKK
GGKK

Nucleotide sequence

Length: 1,095

>Moocci.CG.ELv1_2.S431526.g13341.01.t
ATGGCATGTTCAAGGCCTCTCGTAAGTGTTTATAGTGACAATGGAACACCATCCGGAAAT
TCGGTAACTTTACCAGCTGTTTTCAAATCGCCTATTAGGCCAGACATTGTTAATTTCGTT
CACACCAATGTAGTGAAAAACAAGCGTCAACCTTATGCTGTTAATCGCAAGGCAGGAGAA
CAAACAAGTGCTGAGTCATGGGGCACAGGGCGAGCTGTTGCTCGTATCCCTCGTGTAAGA
GGTGGCGGTACCCATAGATCTGGACAAGCTGCTTTTGGCAACATGTGCAGAGGTGGAAGA
ATGTTTAACCCAACTAAAACTCACCGACGCTGGCATCGCAAATGTAATGTACAACAACGA
CGATTGGCGATGTGCTCAGCTCTTGCTGCATCTGCTCTCCCTTCCTTAATTATGGCTAAA
GGTCACAAAATTGAACAAATACCAGAAGTTCCTTTGGTTGTTGAAGATAAAGTTCAAGAA
TACAAGAAAACCAAAGAAGCTGTTATGCTTTTGAAAAAACTTAAAGTATGGGATGATATT
AAAAAAGTTATTAAATCAAAGCGCATGCGAGCTGGTAGAGGAAAAATGCGAAACCGCAGA
AGAACAATGCGTCGAGGTCCTTGCGTTATATATTCCCAAGATGATGGAATAGTTAGAGCA
TTTAGAAATATTCCTGGTATTACTTTATTAAATGTTCAGCGACTTAATCTTTTAAATGTA
GCTCCAGGAGGGCATGTTGGACGATTTTTAATCTGGACCGAAAGTGCAGTTAAAGAACTT
GACAAGCTCTATGGTACATGGAGACGCCCGTCACAGTTGAAGAAGAATTTTAATCTTCCA
ATGCCTAAAATGACATGCACTGACCTTACAAAGATTATGAAGTCTGATGAATTGCGAGCA
GTACTTCGTCCTAAACTGGCGAAACCAAGACGTCGCACACAGAAGAAAAATCCACTTAAA
AATGTCAGAGTTATGCTGCGCCTTAATCCTGCATCAGTCAGTTTTAGGCGAGCTGCTTTG
TTAACTGAAGCAAGACGTGCTAAAGAAAAGGCACAGAAAAAAGCTGAAAAGGCCAAAAAG
GGTGGAAAGAAATAG

InterProScan

Gene3D	Ribosomal_L4_dom_sf (IPR023574) - T[2-304] 4.1E-140
SUPERFAMILY	Ribosomal_L4_dom_sf (IPR023574) - T[7-262] 1.7E-83
Pfam	Ribosomal_L4/L1e (IPR002136) - T[22-262] 1.3E-40
Pfam	Ribos_L4_C_dom (IPR025755) - T[275-348] 3.2E-26

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
RL4_HUMAN	70.538 %	497	1.13E-176