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  1. Transcript 'Moocci.CG.ELv1_2.S43...'

Transcript Model

Transcript Id

Moocci.CG.ELv1_2.S438284.g13720.01.t

Possible name(s)

FER1L6; MYOF; OTOF

Gene model

Moocci.CG.ELv1_2.S438284.g13720

Location

S438284 [54,122 / 55,360]

Sequences

Amino acid sequence

Length: 188

>Moocci.CG.ELv1_2.S438284.g13720.01.p
WLVGEDKQETDIHYRSLTGEGNFNWRFVYPFDYLVAEEKIVVTKKESVFSWDETEFKIPP
RLNLQVWDADHFSADDFLGSLTLDLTRLPRGAKSAAKCSLNMATDDEDLNNCSIPMVSLF
KQRRIKGWWPFTAKNAEDELEITGKVEAEIVLMTADEAEKNPAGLGRDEPDPLEKPKSVF
NALSQTLT

Nucleotide sequence

Length: 564

>Moocci.CG.ELv1_2.S438284.g13720.01.t
TGGCTGGTCGGGGAGGACAAACAGGAGACGGATATCCACTACAGATCGCTGACAGGAGAG
GGGAACTTTAACTGGCGATTTGTTTACCCGTTCGATTACTTGGTCGCTGAGGAAAAGATT
GTTGTTACTAAGAAGGAATCTGTTTTTTCTTGGGATGAAACAGAGTTCAAAATTCCGCCA
CGGTTAAATCTTCAAGTTTGGGATGCAGATCATTTCTCCGCCGATGACTTTTTAGGATCT
TTAACTCTGGATCTTACTCGGCTTCCAAGAGGTGCAAAATCTGCAGCCAAGTGCAGTTTG
AACATGGCAACTGATGATGAGGACCTTAATAACTGCAGCATCCCCATGGTATCACTGTTT
AAGCAGAGAAGAATAAAAGGTTGGTGGCCATTCACCGCAAAGAACGCTGAAGATGAGTTG
GAGATAACGGGAAAAGTGGAAGCAGAGATTGTGCTGATGACAGCTGACGAAGCTGAAAAG
AATCCAGCAGGTTTGGGGAGAGACGAACCGGATCCACTGGAAAAACCAAAGTCAGTATTC
AATGCATTAAGCCAAACCTTGACT

InterProScan

Gene3D
C2_domain_sf (IPR035892) - T[1-116] 1.9E-13
CDD
C2F_Ferlin (IPR037725) - T[1-100] 6.15401E-62
PANTHER
Otoferlin (IPR029996) - T[3-177] 6.4E-92
PANTHER
Ferlin (IPR037721) - T[3-177] 6.4E-92
Pfam
C2_dom (IPR000008) - T[52-93] 1.4E-4
Pfam
Ferlin_C (IPR032362) - T[142-178] 4.0E-8

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
OTOF_HUMAN 69.101 % 271 1.35E-84
FR1L6_HUMAN 52.809 % 193 2.89E-57
MYOF_HUMAN 52.023 % 181 5.14E-53