- Transcript 'Moocci.CG.ELv1_2.S43...'
Transcript Model
Transcript Id
Moocci.CG.ELv1_2.S438880.g13757.01.t
Possible name(s)
FBN1; FBN3; HMCN1
Gene model
Location
S438880 [7,666 / 16,461]
Amino acid sequence
Length: 1,026
>Moocci.CG.ELv1_2.S438880.g13757.01.p
MLKIVIAERITPQAATRNCYWSSWSSWSSCSRTCGGGSQSHTRYKSSTAYCGGRDCSGYT
YGSRSCNTQCCPVNCSWRSWGSWSTCTQSCGGGQKTRSRVKNRASCGGRSYCSGSSTSTT
TCNTQCCPINCKWGTWSNWSECSKICGSGIQNRSRLVSIPRYCSGLECSGSASDSQACNE
QCCPLHCSWSSWSQWSLCTASCGGGVQKRIRVKHPTAVCGGEDCVGQNEESQKCNTHCCA
VDCQWSRWANWNSCSRTCGGGTTTRTRSIAIKSFCGGSSCKGNNIIRKNCNTQCCPVDCI
ISSWSSWSSCTANCGTKGSQSRSRRVIRYNTCGGQSCPLTKSDTKQCNRFCYNNGIVQNN
FCVCQVGWKGECCKIDVNECEDNGHRCHENAICSNTEGSYFCQCHIGYSGDGRQCFDVNE
CSRLETASGDESMEVGFSGEESGSGKENGSSEISEGSEMSGSGEISGSGEENELCNQNAL
CINTIGSYLCKCVQGFYGDGKVCNDINECTENSHQCDENAICSNTEGSYSCQCQIGYSGD
GRRCVDINECTEKSHQCDENAICSNSEGSYSCQCQIGYRGDGRHCVDINECTEKSHQCNE
NAMCLNTEGSYSCQYYDTSETDLMKHNCHGNATCLNTIGSFDCLCYNGFYGNGTNCRDVD
ECEETIHRCHENAICLNTEGSYSCQCQIGYSGDGRHCVGNNSIRTGFSGKEIRSGKMSES
GENIGSGEETRSGEESGSGEENNLCHQNALCINTIGSYLCKCVQGFYGNGVICEGLEQST
FYFLHLNQLQLTNFSFFKQNFTQIYVDINECSENSHQCDENAMCSNTEGSYSCQCQIGYS
GDGRYCFDLDECNSYLEVGSGDGGFIGEESGSDKTIELCHQNALCFNTPGSYLCKCVQGF
YGDGKVCNDVNECFTKGDRSFDFKTGSDNPNKEYDYWTDYFDSDISDPGSLKHNCHGNAT
CINTIGSFDCLCYNGFYGNGETCIEIDECLSNPCQNGATCMNEIDNYSCTCQPGFSGSIC
QIAQKN
Nucleotide sequence
Length: 3,081
>Moocci.CG.ELv1_2.S438880.g13757.01.t
ATGCTAAAAATTGTAATTGCAGAAAGGATTACTCCACAAGCTGCTACCAGAAACTGTTAT
TGGTCTTCCTGGTCATCATGGAGTTCTTGTTCTCGGACATGTGGAGGAGGGTCACAGTCT
CATACTAGATACAAAAGTTCTACAGCTTACTGTGGCGGAAGAGACTGCTCAGGGTATACT
TATGGAAGTAGAAGTTGCAATACACAATGTTGTCCTGTAAACTGCTCATGGCGTTCTTGG
GGAAGTTGGAGTACTTGTACACAGTCTTGTGGTGGTGGACAGAAAACTCGAAGTCGTGTA
AAAAATAGAGCAAGCTGTGGAGGGCGAAGTTATTGCAGTGGTTCGTCCACCAGTACAACA
ACATGCAATACCCAATGCTGTCCTATAAATTGCAAATGGGGAACTTGGTCTAATTGGAGT
GAATGCTCCAAAATTTGCGGAAGTGGTATACAAAACAGATCACGCTTAGTCAGTATACCA
AGGTACTGTAGTGGATTGGAATGCAGTGGTTCGGCATCGGATTCACAAGCATGCAATGAA
CAATGTTGTCCTCTTCACTGTTCATGGAGTTCGTGGTCACAGTGGAGCTTGTGTACAGCT
TCATGTGGTGGCGGGGTCCAAAAAAGAATAAGAGTAAAACATCCCACTGCTGTATGTGGG
GGAGAAGATTGCGTTGGACAAAATGAAGAATCACAGAAATGTAACACTCATTGTTGCGCG
GTTGATTGTCAATGGAGCAGGTGGGCGAATTGGAATTCTTGTTCACGAACATGTGGCGGA
GGGACTACAACAAGAACTAGGTCCATAGCTATAAAATCTTTTTGCGGCGGATCATCATGT
AAAGGGAATAATATTATTCGAAAAAATTGTAATACTCAATGTTGTCCAGTTGACTGCATT
ATAAGCAGTTGGAGCTCTTGGTCATCTTGTACCGCAAATTGTGGGACCAAGGGAAGCCAA
AGCAGATCTCGAAGAGTAATCCGATATAACACTTGTGGTGGTCAATCTTGTCCTTTAACA
AAGTCCGATACAAAGCAATGCAACCGATTCTGTTATAACAATGGAATTGTTCAAAATAAT
TTTTGTGTATGTCAGGTTGGGTGGAAAGGCGAATGTTGTAAAATAGACGTTAATGAATGT
GAAGACAACGGCCACAGGTGTCATGAGAATGCGATATGCTCAAACACAGAAGGGTCATAT
TTTTGTCAATGTCATATTGGATACAGTGGAGATGGAAGACAATGTTTTGATGTGAACGAA
TGCAGTCGTCTAGAGACTGCCAGTGGAGACGAAAGTATGGAAGTAGGTTTTAGCGGTGAA
GAAAGTGGAAGCGGTAAAGAAAATGGAAGCAGTGAAATAAGTGAAGGGAGTGAAATGAGT
GGAAGTGGTGAAATAAGTGGAAGCGGGGAAGAAAATGAATTATGCAATCAAAACGCATTG
TGTATTAATACAATTGGAAGTTACTTGTGTAAATGTGTCCAAGGGTTTTATGGTGACGGA
AAAGTGTGCAATGACATAAATGAATGTACGGAGAATAGTCATCAATGTGACGAAAATGCG
ATATGCTCTAACACAGAAGGGTCTTACTCTTGTCAGTGTCAAATTGGATACAGTGGGGAC
GGAAGACGCTGTGTTGACATAAATGAATGTACGGAAAAAAGTCACCAATGTGACGAAAAT
GCGATATGCTCAAATTCAGAAGGATCTTACTCTTGTCAATGTCAGATTGGATACAGAGGG
GATGGAAGACACTGTGTTGACATAAATGAATGTACGGAAAAAAGTCACCAATGTAACGAA
AATGCGATGTGTTTAAACACAGAAGGATCTTACTCTTGTCAATATTATGATACCAGCGAA
ACAGATTTAATGAAGCATAACTGCCATGGCAACGCAACATGCTTAAACACAATCGGAAGT
TTTGATTGTTTGTGTTATAATGGCTTCTATGGAAATGGTACAAATTGTAGAGATGTAGAC
GAATGTGAAGAAACCATCCACAGGTGTCATGAGAACGCGATATGTTTAAACACAGAAGGG
TCTTACTCTTGCCAGTGTCAGATTGGATACAGTGGCGATGGAAGACACTGTGTTGGTAAT
AATTCCATTCGTACAGGTTTTAGCGGTAAGGAAATTAGAAGTGGTAAAATGAGTGAAAGC
GGTGAAAACATTGGAAGCGGTGAAGAAACTAGAAGCGGTGAAGAAAGTGGAAGCGGTGAA
GAAAATAATTTATGCCATCAAAACGCGTTGTGTATTAATACTATTGGAAGTTACTTGTGT
AAATGTGTTCAAGGGTTTTATGGAAATGGTGTAATATGCGAAGGTTTGGAGCAGTCTACA
TTTTATTTCTTACATTTAAATCAACTACAATTAACTAATTTTTCATTTTTCAAACAAAAC
TTTACTCAAATATATGTAGACATAAACGAATGCAGTGAAAATAGTCATCAATGTGACGAG
AACGCGATGTGTTCAAACACAGAAGGGTCTTACTCTTGTCAATGTCAGATTGGATACAGT
GGTGATGGAAGGTACTGTTTTGATTTGGACGAATGCAACAGTTACTTGGAAGTTGGTAGT
GGAGATGGAGGTTTCATTGGCGAGGAAAGTGGAAGCGACAAAACAATTGAATTATGCCAT
CAAAACGCATTGTGTTTTAATACTCCCGGAAGTTACTTGTGTAAATGTGTTCAAGGCTTT
TATGGTGACGGAAAAGTGTGCAATGATGTGAACGAATGTTTTACTAAAGGGGATAGATCT
TTTGATTTTAAAACTGGATCAGACAACCCAAATAAAGAATATGATTATTGGACAGATTAT
TTTGATTCTGATATCAGTGACCCAGGTTCATTGAAGCATAACTGCCATGGCAACGCAACA
TGCATAAACACAATCGGAAGTTTTGATTGCTTGTGTTATAATGGCTTCTATGGAAATGGG
GAAACTTGTATAGAAATTGATGAATGTCTGTCGAACCCATGCCAGAACGGTGCAACATGC
ATGAATGAAATAGACAATTACTCTTGTACATGTCAACCGGGTTTCAGTGGTTCAATTTGT
CAAATAGCGCAAAAAAATTAA
| Gene3D |
TSP1_rpt_sf (IPR036383) - T[17-72] 1.0E-8 - T[73-127] 4.3E-9 - T[128-183] 3.9E-11 - T[184-239] 1.8E-12 - T[240-295] 9.8E-11 - T[297-347] 4.1E-9 |
| ProSiteProfiles |
TSP1_rpt (IPR000884) - T[18-72] 11.509 - T[74-128] 11.468 - T[130-184] 11.957 - T[186-240] 12.354 - T[242-296] 11.804 - T[298-352] 10.707 |
| SUPERFAMILY |
TSP1_rpt_sf (IPR036383) - T[18-69] 7.72E-10 - T[70-127] 3.53E-9 - T[126-183] 5.49E-12 - T[182-239] 8.24E-12 - T[238-295] 1.96E-11 - T[294-349] 1.83E-9 |
| SMART |
TSP1_rpt (IPR000884) - T[21-72] 5.2E-9 - T[77-128] 1.1E-6 - T[133-184] 4.3E-12 - T[189-240] 5.5E-12 - T[245-296] 4.2E-9 - T[301-352] 2.9E-4 |
| Pfam |
TSP1_rpt (IPR000884) - T[22-71] 1.8E-5 - T[79-127] 8.4E-4 - T[135-183] 4.4E-9 - T[190-239] 6.1E-8 - T[246-295] 6.5E-7 - T[302-348] 4.0E-5 |
| SMART |
EGF-like_Ca-bd_dom (IPR001881) - T[376-416] 1.3E-7 - T[417-504] 1.7E-6 - T[505-545] 1.7E-9 - T[546-586] 5.1E-10 - T[587-657] 7.5E-5 - T[658-698] 1.3E-10 - T[741-774] 0.001 - T[807-847] 5.2E-8 - T[848-908] 1.6E-7 - T[909-984] 4.3E-7 - T[985-1021] 4.5E-11 |
| ProSiteProfiles |
EGF-like_dom (IPR000742) - T[376-416] 16.505 - T[466-504] 8.28 - T[505-545] 17.012 - T[546-586] 16.3 - T[617-657] 11.235 - T[658-698] 18.217 - T[735-774] 10.618 - T[807-847] 15.884 - T[871-908] 9.834 - T[945-984] 11.053 - T[985-1021] 23.866 |
| SMART |
EGF-like_dom (IPR000742) - T[379-416] 0.0062 - T[420-504] 21.0 - T[508-545] 2.5E-4 - T[549-586] 3.4E-4 - T[612-657] 0.21 - T[661-698] 4.9E-5 - T[734-774] 0.44 - T[810-847] 0.042 - T[851-908] 0.25 - T[950-984] 0.41 - T[988-1021] 4.2E-8 |
| Pfam |
EGF_dom (IPR024731) - T[380-415] 1.4E-9 - T[470-503] 5.2E-9 - T[509-544] 9.3E-11 - T[625-656] 1.6E-7 - T[740-773] 3.7E-10 - T[811-846] 4.0E-11 - T[879-907] 3.6E-9 - T[952-983] 1.1E-7 |
| ProSitePatterns |
EGF-type_Asp/Asn_hydroxyl_site (IPR000152) - T[393-404] . - T[481-492] . - T[522-533] . - T[563-574] . - T[634-645] . - T[675-686] . - T[751-762] . - T[824-835] . - T[885-896] . - T[961-972] . - T[1000-1011] . |
| ProSitePatterns |
EGF-like_CS (IPR013032) - T[402-415] . - T[490-503] . - T[531-544] . - T[572-585] . - T[643-656] . - T[684-697] . - T[760-773] . - T[833-846] . - T[894-907] . - T[970-983] . - T[1009-1020] . - T[1009-1020] . |
| SUPERFAMILY |
Growth_fac_rcpt_cys_sf (IPR009030) - T[475-598] 3.22E-14 - T[598-699] 4.87E-9 - T[745-774] 4.87E-9 |
| ProSitePatterns |
EGF_Ca-bd_CS (IPR018097) - T[505-531] . - T[658-684] . - T[985-1009] . |
| Pfam |
EGF-like_Ca-bd_dom (IPR001881) - T[546-585] 3.7E-10 - T[587-614] 7.8E-8 - T[658-697] 4.2E-11 |
| Pfam |
EGF-like_dom (IPR000742) - T[989-1017] 1.3E-8 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FBN3_HUMAN | 30.115 % | 194 | 2.54E-50 |
| HMCN1_HUMAN | 39.169 % | 228 | 5.13E-61 |
| FBN1_HUMAN | 30 % | 209 | 6.98E-55 |