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TRANSCRIPT CARD

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  1. Clone 'cign014b24'
  2. Clone 'cima008b03'
  3. Clone 'cima821284'
  4. Clone 'cien201986'
  5. Transcript 'Moocci.CG.ELv1_2.S45...'

Transcript Model

Transcript Id

Moocci.CG.ELv1_2.S454960.g14763.01.t

Possible name(s)

CALM3; EFHD1; TNNC2

Location

S454960 [14,943 / 15,519]

Sequences

Amino acid sequence

Length: 191

>Moocci.CG.ELv1_2.S454960.g14763.01.p
MGNVTFSLQPEVVSYHRPQDYNAFGEKHVDVIKEENEIDLLHRSHCEEIFAQRRANNEKR
KLLTGVSNEDYARRYPQWSADDIGDYKIQFEIFDLNRDGVIDFKEMNSVLDEFGEISSHQ
ERWAIFKEMDTDQSNTIDFEEFLMVVGKLQRSMQKKSRADDNINNIVMRGASQTKNLRRM
SVYKQLTNGIF

Nucleotide sequence

Length: 576

>Moocci.CG.ELv1_2.S454960.g14763.01.t
ATGGGAAACGTGACGTTTTCTCTACAGCCGGAAGTTGTCTCCTACCATCGACCCCAAGAC
TACAATGCTTTCGGAGAAAAACATGTCGATGTTATCAAAGAAGAAAATGAAATAGATTTA
TTACACAGATCTCACTGTGAAGAAATTTTTGCTCAACGTAGAGCAAACAACGAAAAACGT
AAATTATTGACAGGGGTATCGAATGAAGATTACGCGCGACGATATCCACAATGGAGTGCA
GATGACATTGGAGATTATAAAATCCAGTTTGAAATATTTGACTTAAACAGAGATGGTGTC
ATTGATTTTAAAGAAATGAACTCCGTTCTGGATGAATTTGGTGAGATAAGTTCACATCAG
GAAAGATGGGCAATTTTCAAAGAAATGGATACCGATCAAAGTAACACAATAGATTTTGAA
GAATTTCTCATGGTGGTTGGAAAATTACAAAGAAGCATGCAAAAGAAATCTAGAGCTGAT
GATAACATAAACAACATTGTGATGAGAGGTGCAAGTCAAACGAAAAACTTGCGACGAATG
TCAGTTTACAAACAACTCACAAATGGAATTTTTTGA

InterProScan

SUPERFAMILY
EF-hand-dom_pair (IPR011992) - T[77-152] 1.03E-16
ProSiteProfiles
EF_hand_dom (IPR002048) - T[81-116] 11.808 - T[117-152] 12.114
SMART
EF_hand_dom (IPR002048) - T[85-113] 2.6 - T[121-149] 0.018
Pfam
EF_hand_dom (IPR002048) - T[87-143] 1.8E-7
CDD
EF_hand_dom (IPR002048) - T[90-146] 1.16611E-14
ProSitePatterns
EF_Hand_1_Ca_BS (IPR018247) - T[94-106] . - T[130-142] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value