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TRANSCRIPT CARD

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  1. Transcript 'Phmamm.CG.MTP2014.S1...' > 
  2. Transcript 'Cisavi.CG.ENS81.R27....' > 
  3. Transcript 'KH2012:KH.C14.422.v1...' > 
  4. Transcript 'KH2012:KH.L106.19.v1...' > 
  5. Transcript 'Moocci.CG.ELv1_2.S45...'

Transcript Model

Transcript Id

Moocci.CG.ELv1_2.S456390.g14918.01.t

Possible name(s)

TNRC6C; UBAC1; USP13

Gene model

Moocci.CG.ELv1_2.S456390.g14918

Location

S456390 [53,299 / 54,693]

Sequences

Amino acid sequence

Length: 369

>Moocci.CG.ELv1_2.S456390.g14918.01.p
MYKEQKELHGNKFHVTIISQAGNESKIEVSWETKIEQLKDIALKKLDLNSSDSNGYHIIK
VSNGSKKLQMANTVRMEGINGFDSLLLYPARKEVSQKDTSSSTADAPSMSVIRKATANMP
TNEKSKQTKENNSPTPQPVATSLEHTFRKILLTLLDLSYQLMFFDEDAQQIFSKDYEAPV
DPDLIKQLTDMGFSEKRAREALLLNDMNVEISMEWMLRHPEPMEEDPPSQTNVSSSEKEL
NTSRSVSDISKRMGRWRKKANNSVTSSAHISSLMDMGFTKEECIEALTYNGNNLNSACNW
LLGERTIPEEDPNDTLDPESGLYKAIINNPTIHVGLHNKRVLEALEDMLENPQRRHNWAN
DPTVGSFLE

Nucleotide sequence

Length: 1,221

>Moocci.CG.ELv1_2.S456390.g14918.01.t
GCTAGAGTCACCGCGATAAACGTCTGATGAGCGAACGTCTGCTAGAGTCACCGAGGTCTT
CCTTGATTGTAAATGTAAACTGTAGAAATACTTTTATTAGCAAAAAGTATCATGTATAAA
GAGCAAAAAGAATTGCATGGAAATAAATTTCATGTGACTATTATTTCTCAAGCTGGAAAT
GAAAGTAAAATTGAAGTATCTTGGGAAACTAAAATAGAACAATTGAAAGACATTGCATTG
AAAAAGTTGGATTTAAATTCATCTGATTCAAATGGTTATCATATTATTAAAGTTAGTAAT
GGAAGCAAGAAGTTACAAATGGCCAATACAGTTAGAATGGAAGGGATAAATGGGTTTGAT
TCCCTTTTACTTTACCCTGCAAGAAAAGAAGTTTCTCAGAAAGATACTTCATCATCAACT
GCAGATGCACCTTCCATGTCTGTGATTCGTAAAGCAACTGCAAATATGCCAACAAATGAA
AAATCTAAACAAACAAAGGAAAACAATAGTCCTACTCCTCAGCCAGTTGCTACATCATTG
GAACATACATTCAGAAAGATTTTGTTAACTTTACTTGATTTGTCTTACCAACTAATGTTT
TTTGATGAAGATGCTCAGCAAATATTTAGCAAAGACTATGAAGCCCCTGTTGATCCAGAT
TTAATCAAGCAGTTAACTGATATGGGATTTAGTGAGAAAAGAGCCAGAGAAGCATTACTA
TTAAATGATATGAATGTTGAAATATCAATGGAATGGATGTTACGGCATCCAGAGCCAATG
GAAGAAGATCCTCCCAGTCAAACCAATGTAAGTTCTTCTGAGAAAGAACTCAATACATCA
AGATCAGTTAGTGACATTTCAAAAAGAATGGGTAGATGGAGAAAGAAGGCAAACAACTCG
GTGACTAGTTCAGCACACATTTCATCTTTAATGGATATGGGATTTACGAAGGAAGAATGC
ATAGAAGCATTAACGTATAATGGCAACAACTTGAATTCTGCTTGTAATTGGTTGTTAGGT
GAAAGAACAATTCCTGAAGAAGACCCTAATGACACTTTGGATCCTGAAAGTGGTTTGTAT
AAAGCAATTATAAATAATCCAACTATCCATGTGGGGTTGCACAACAAACGTGTTTTAGAA
GCTTTGGAAGACATGCTGGAAAATCCACAAAGGCGTCACAACTGGGCAAATGATCCTACA
GTTGGTTCTTTTTTGGAGTAG

InterProScan

SUPERFAMILY
UBA-like_sf (IPR009060) - T[163-229] 4.09E-15 - T[258-305] 1.55E-12
ProSiteProfiles
UBA (IPR015940) - T[179-219] 13.438 - T[263-304] 13.149
Pfam
UBA (IPR015940) - T[181-215] 1.7E-6 - T[267-301] 4.2E-9
SMART
UBA (IPR015940) - T[181-218] 8.8E-6 - T[266-303] 3.0E-8

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
UBAC1_HUMAN 31.83 % 172 4.92E-50