- Transcript 'Moocci.CG.ELv1_2.S45...'
Transcript Model
Transcript Id
Moocci.CG.ELv1_2.S458968.g15115.01.t
Possible name(s)
COL21A1; COL22A1; MATN1
Gene model
Location
S458968 [63,453 / 69,786]
Amino acid sequence
Length: 487
>Moocci.CG.ELv1_2.S458968.g15115.01.p
MRENKGERGYDGGKGDKGERGYDGGKGDKGMKGMMGLCGKPGPTGLPGLNGLPGIEGPQG
QRGPPGEQGVQGRAGVVSTLYVYCKYINTQLNTNECSCEQLLLSKNSKKYEYSLIARHHE
PLVAIDKPLAISEFKASSGHFLMDVDRGDETVRETISFSTNRLPAELEPQTYACKTSMYP
TTPTEEVAGIRGFPGDKGEPGLIGPSGLPGPPGFQGDKGDRGLQGPEGRQGISGLPGLPG
LDCNCNIDATLRKLIIEIVRDILPGSKYNLQNDKCDTPEPVPFTAEPPSYREPTTSSPHP
CESQPVQIVFLVDGSDSIDANDFTLVKNWIKSIINNFKPSTRTQPLHVTVVQYSDFPREE
VSGLIGPRSNYINIIDSISQMATGTNTYNALQFVDSKYTVYIQSYPQRFLITMTDGSARD
TLNPNVISHLKSSFTKMIGIGVGPNADIREIETYSTVGNVFNVPSFAGLNNIINKITNCT
CPGHENY
Nucleotide sequence
Length: 1,464
>Moocci.CG.ELv1_2.S458968.g15115.01.t
ATGCGAGAAAATAAAGGTGAAAGAGGATACGATGGTGGAAAAGGAGACAAGGGTGAAAGA
GGATACGATGGTGGAAAAGGAGACAAGGGCATGAAGGGAATGATGGGATTATGTGGAAAA
CCAGGCCCGACTGGATTACCCGGACTTAACGGCTTGCCTGGCATAGAAGGCCCCCAAGGT
CAAAGGGGACCCCCCGGTGAACAAGGTGTTCAGGGAAGAGCTGGGGTTGTAAGTACTTTA
TACGTTTACTGCAAATATATAAATACACAACTTAATACTAACGAATGTAGTTGCGAACAA
CTGCTACTAAGTAAAAATTCAAAAAAGTACGAGTATTCACTCATTGCAAGGCACCATGAA
CCACTCGTGGCTATAGACAAACCCCTGGCTATAAGCGAGTTCAAGGCCTCTTCGGGGCAC
TTTTTAATGGATGTTGACAGGGGTGACGAAACCGTTAGAGAAACAATCTCTTTTTCCACG
AATCGGTTACCGGCAGAACTGGAACCCCAAACGTACGCCTGTAAGACCAGCATGTATCCA
ACTACGCCAACAGAAGAAGTAGCAGGCATAAGAGGTTTTCCAGGAGACAAGGGAGAACCC
GGATTAATTGGACCATCTGGGCTACCCGGACCACCGGGCTTCCAGGGTGATAAAGGAGAC
AGAGGTCTGCAAGGTCCTGAAGGCCGGCAAGGAATTTCTGGGCTGCCCGGATTGCCCGGG
TTGGACTGCAACTGTAATATAGACGCAACTTTGCGGAAACTGATTATTGAGATTGTAAGA
GACATTTTGCCAGGGAGTAAGTATAATTTACAGAATGATAAATGTGACACACCGGAACCT
GTGCCTTTTACAGCAGAACCACCGAGCTATAGAGAACCAACAACATCTTCTCCACATCCA
TGCGAAAGCCAACCGGTACAAATAGTATTTTTGGTTGACGGAAGTGACTCAATCGACGCA
AATGATTTTACATTGGTTAAAAACTGGATTAAAAGCATAATAAACAATTTTAAACCATCA
ACCAGAACACAGCCGCTACATGTCACTGTGGTGCAGTATTCAGATTTTCCAAGAGAGGAG
GTATCTGGATTAATAGGCCCAAGAAGTAATTACATCAACATCATAGATAGCATAAGCCAA
ATGGCCACTGGGACAAACACATACAATGCCCTTCAATTTGTGGATAGTAAATACACAGTT
TATATCCAAAGTTACCCCCAACGGTTCCTCATTACAATGACAGATGGTTCTGCACGAGAT
ACTCTTAATCCAAATGTCATAAGCCATCTAAAGAGCAGTTTTACCAAAATGATAGGGATT
GGGGTTGGCCCAAATGCAGATATTAGAGAGATCGAAACGTATTCTACAGTAGGCAATGTG
TTCAACGTACCTTCGTTTGCTGGATTGAACAACATCATTAATAAAATTACTAACTGTACT
TGTCCTGGTCATGAGAATTACTAA
| Pfam |
Collagen (IPR008160) - T[5-57] 6.9E-7 - T[27-75] 1.7E-7 - T[189-240] 2.1E-9 |
| SUPERFAMILY |
vWFA_dom_sf (IPR036465) - T[291-482] 2.23E-34 |
| Gene3D |
vWFA_dom_sf (IPR036465) - T[293-485] 1.0E-30 |
| SMART |
VWF_A (IPR002035) - T[305-481] 3.5E-13 |
| ProSiteProfiles |
VWF_A (IPR002035) - T[307-476] 19.763 |
| Pfam |
VWF_A (IPR002035) - T[308-474] 2.0E-20 |
| Protein Name | Identity | Bit Score | e-value |
|---|