- Transcript 'Phmamm.CG.MTP2014.S2...' >
- Transcript 'Cisavi.CG.ENS81.R194...' >
- Transcript 'Moocci.CG.ELv1_2.S46...'
Transcript Model
Transcript Id
Moocci.CG.ELv1_2.S461829.g15322.01.t
Possible name(s)
LHX1; LHX3; LHX4
Gene model
Location
S461829 [33,833 / 35,267]
Amino acid sequence
Length: 235
>Moocci.CG.ELv1_2.S461829.g15322.01.p
MDTGDHFYLIEDGRLVCKNDYEQVKARDIDFESGSKRPRTTISAKQLETLKSAYNQSSKP
ARHVREQLSADTGLDMRVVQVWFQNRRAKEKRLKKDVGRQRWGHFYSQTQVSDDSVDSKQ
EIKDTQFSEQQSHFIISKEDISIASHENDMYKDNEGSFTTFNPDFPQHFLSPSNHPDTSQ
FLASAALNLRVSENVLPRQHENFTFIPFSPESTNSEFSKSPESWLGDFDKKQSSF
Nucleotide sequence
Length: 708
>Moocci.CG.ELv1_2.S461829.g15322.01.t
ATGGACACGGGAGATCATTTCTATTTAATCGAAGACGGAAGACTTGTTTGTAAAAACGAT
TACGAGCAAGTCAAAGCGAGAGATATTGATTTTGAAAGTGGATCCAAACGACCAAGGACA
ACAATATCAGCCAAACAGTTGGAAACTTTGAAGTCAGCCTATAACCAAAGTTCGAAACCG
GCGCGACATGTGCGCGAACAACTGAGCGCGGATACAGGGCTTGATATGAGGGTGGTCCAG
GTTTGGTTTCAAAATCGACGAGCAAAAGAAAAGCGACTAAAAAAAGATGTGGGCAGGCAA
AGATGGGGACATTTTTACTCTCAAACTCAAGTCTCAGATGACTCGGTGGATTCAAAACAG
GAAATCAAAGACACACAATTTTCCGAACAACAGTCACATTTTATCATAAGTAAAGAAGAT
ATAAGTATCGCATCTCACGAAAACGACATGTACAAAGACAATGAGGGAAGTTTTACGACG
TTCAACCCCGATTTCCCCCAGCACTTTCTCTCGCCATCCAACCACCCTGATACTTCTCAA
TTCCTCGCGTCTGCAGCACTTAACTTGAGAGTTTCCGAAAACGTGTTGCCTCGGCAACAC
GAAAACTTCACTTTCATTCCGTTTTCTCCCGAAAGCACAAATTCTGAATTTAGTAAGAGT
CCAGAATCTTGGTTAGGTGATTTTGATAAAAAACAATCATCGTTCTAG
| SUPERFAMILY |
Homeobox-like_sf (IPR009057) - T[30-95] 7.27E-20 |
| ProSiteProfiles |
Homeobox_dom (IPR001356) - T[33-93] 17.734 |
| SMART |
Homeobox_dom (IPR001356) - T[35-97] 8.3E-22 |
| CDD |
Homeobox_dom (IPR001356) - T[36-94] 5.09663E-18 |
| Pfam |
Homeobox_dom (IPR001356) - T[36-92] 1.8E-20 |
| ProSitePatterns |
Homeobox_CS (IPR017970) - T[68-91] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| LHX4_HUMAN | 61.212 % | 182 | 1.08E-55 |
| LHX3_HUMAN | 64.444 % | 174 | 1.02E-52 |
| LHX1_HUMAN | 35.556 % | 102 | 2.21E-25 |