- Transcript 'Moocci.CG.ELv1_2.S46...'
Transcript Model
Transcript Id
Moocci.CG.ELv1_2.S465161.g15555.01.t
Possible name(s)
SOX14; SOX2; SOX21
Gene model
Location
S465161 [35,527 / 38,360]
Amino acid sequence
Length: 421
>Moocci.CG.ELv1_2.S465161.g15555.01.p
MLAVDSQSTGPSWMQIPYQQGGVIPPNLPPPPVVSGSENGQLIHQMDVKPMYSTSGEQMS
PVMHMQQHLHPAQVQANASNQNNKTSQEQRVKRPMNAFMVWSRGQRRKMAQENPKMHNSE
ISKRLGAEWKLLTDTDKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKNLLKKDKYGASVM
PPTSLAQPSPPMRSLASGLEGYPHGFGGYHTPHMMHQEALAYGSQSYGVPNSQSNQGPPR
YEVYPYNNYTSSASLPSMANIGAHQQHAVNGYMSAHASYGPPLSTTPPYSHMSPHGAVPV
GSQSGSSTGVKSPTGSSPGATTPGPQTNPAPEASPIQSHPINMSQTQPPQNQHGAPIQSM
ISMYLPHGDPNNPMTQQEDGSPNSQVTALQPVTHYSPMVTSIGAPGGVPVPMHHMAPHYA
Q
Nucleotide sequence
Length: 2,311
>Moocci.CG.ELv1_2.S465161.g15555.01.t
TTTCGTTTTATTTAGATTTTCTGAAACAATTAAATATTATTCTTAAATTATTGGACAAAG
AAAAGTAAAACAATTTAACGAAACAACCTACTCGATCTCAAATCTTCGGGAATCCAAAAC
TTAAAAAATATGTTGGCAGTTGATTCTCAATCTACAGGACCTAGTTGGATGCAGATTCCA
TACCAACAAGGGGGAGTCATCCCTCCAAATCTTCCTCCTCCTCCAGTTGTATCAGGAAGT
GAAAATGGACAGTTGATTCATCAAATGGACGTGAAACCAATGTACTCGACATCGGGAGAA
CAAATGTCACCGGTTATGCATATGCAGCAGCACCTCCACCCAGCACAGGTTCAGGCAAAC
GCAAGCAACCAAAACAACAAAACTTCTCAAGAGCAACGCGTCAAGCGACCTATGAACGCT
TTTATGGTATGGTCTCGTGGTCAAAGACGAAAAATGGCTCAAGAAAATCCAAAAATGCAC
AACTCAGAAATATCAAAGCGTCTTGGAGCCGAATGGAAACTCCTTACCGACACTGACAAG
CGACCGTTTATCGACGAAGCCAAACGATTGAGAGCTTTGCACATGAAAGAACACCCTGAC
TATAAATACCGACCTCGACGCAAAACCAAGAACCTCTTGAAGAAAGACAAATACGGTGCC
AGTGTAATGCCACCGACCTCCCTTGCCCAACCATCGCCCCCAATGCGCTCCCTTGCATCC
GGCCTTGAGGGTTACCCACACGGATTTGGAGGATACCATACACCGCATATGATGCACCAA
GAGGCTCTCGCTTACGGCTCACAATCTTACGGTGTCCCGAATTCACAGAGCAACCAAGGG
CCACCGCGATATGAAGTTTACCCGTACAACAATTATACTTCATCAGCATCCTTGCCAAGC
ATGGCTAATATCGGAGCCCACCAACAACATGCTGTAAACGGATACATGTCAGCACATGCT
TCATACGGTCCCCCACTTTCAACAACACCACCATATTCCCACATGTCCCCACATGGTGCC
GTTCCAGTTGGATCACAATCAGGCAGTAGCACTGGTGTAAAATCGCCAACAGGTTCAAGC
CCCGGAGCAACTACACCAGGTCCACAAACAAACCCAGCCCCAGAAGCCAGTCCCATCCAA
TCCCATCCGATCAATATGAGCCAAACACAGCCGCCACAAAATCAACATGGTGCGCCCATC
CAAAGTATGATTAGTATGTACCTTCCACACGGGGACCCAAATAACCCAATGACCCAACAA
GAAGATGGAAGCCCAAATTCCCAAGTAACCGCATTGCAACCAGTCACCCACTATTCCCCA
ATGGTAACATCGATTGGGGCGCCAGGCGGTGTTCCAGTGCCAATGCACCACATGGCTCCT
CATTATGCTCAGTAAATTAAAATCGGCGAAAACTGATTATTTATTGGCGTCGCGCCGAAG
TGCCTGAGCGACCGACGACTGTGCCATCCATTCAAGGGTTGGTGTCATCTCTCATTGTGA
AGCAAATTTCTCCAAATATTAACATTTTAGCAAATATTTTATAACTCTGTTTCTTCAAGA
TTTATTGTAGCAATGCAAACAGGCGAAACTACTTGAAATGTCGTCGCACAATATTTTATT
TACTTACTTTCCATATTTTAAAGAAAGAACCAAGATAGTAAATGTTTTATTACAATCCGG
CGTGCCTTTTATACTACTTTACCTTGCTCTTGAGAGTATGTAAGACAATTTACCGTGCTA
TTCTTGTTTTGATTAGTTTCATAACCGTTCACATTCACACTATTATTTTACACAATTTTT
ATTTGAAATTTCATATTTTGTCTTGATTTTTTGATATTGCGTATGTAGGCCAGTATGATA
CATTTTCGTTCTATTATTTTTAGTGTATATGATATTGTTTCCTTATCTGCTTACTATTTT
GAATATTTAAATTAATAATATGCATGCCTATTAACAATTGGTCATAATTATTATTTATCA
GTTATCACTGTAGCTTTAAACATTATGTTTTAACGTACTTTTATCCCAGGTCTTAATGGG
TTAACTTATACCTAAATTATATATAATAATAAAAAAAGCGATTTACATTTTCAAATGACA
ATATTGCATACAAATGTATTATCATTAGAATATTGCAATATTATTATTACCGTAACCACT
GTCCAAAGAATCGCTGACTTACCAACCTCATATGATTGTGAGGAATTTATTTTTTCATGC
AGATTGGTCGTATAATTTACTACTAAATTATCAGCTGTTGATCAGCCATTTTATGCCTTT
TTGTTATATAACAGTTAATTATTATAATTAA
| SUPERFAMILY |
HMG_box_dom_sf (IPR036910) - T[84-163] 1.1E-27 |
| Gene3D |
HMG_box_dom_sf (IPR036910) - T[88-166] 2.7E-31 |
| SMART |
HMG_box_dom (IPR009071) - T[90-160] 2.6E-28 |
| ProSiteProfiles |
HMG_box_dom (IPR009071) - T[91-159] 22.789 |
| Pfam |
HMG_box_dom (IPR009071) - T[91-159] 5.5E-27 |
| Pfam |
SOX_fam (IPR022097) - T[160-241] 4.3E-9 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SOX2_HUMAN | 56.842 % | 182 | 2.18E-54 |
| SOX21_HUMAN | 87.64 % | 171 | 2.33E-50 |
| SOX14_HUMAN | 89.412 % | 171 | 7.75E-51 |