Aniseed - Transcript Card

Transcript Model

Transcript Id

Moocci.CG.ELv1_2.S473751.g16273.02.t

Possible name(s)

AC113404.3; RAP1A; RAP1B

Gene model

Moocci.CG.ELv1_2.S473751.g16273

Location

S473751 [2,309 / 9,645]

Sequences

Amino acid sequence

Length: 161

>Moocci.CG.ELv1_2.S473751.g16273.02.p
MREYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVETDNQQCMLEILDTAG
TEQFTAMRDLYMKNGQGFVLVYSIISQSSFGDLQDLREQILRVKDTDDVPMILVGNKCDL
EEERVVGKDQGASLARQWGNCAFLETSAKQKINVNETLHIP

Nucleotide sequence

Length: 640

>Moocci.CG.ELv1_2.S473751.g16273.02.t
GTATTTATAGAAAATAGTTGTACATAATTATAGTTTTATTACTTGTACATTCTGCATTTA
AAAAAAGAGGTTGTAAATAAGGAGTGGACTTGGTCAGTTCAATTTTTTGTTTCCTAGATA
CACATAATTTTATATTTACGTTCTTACAAGAAATATAATGCGAGAGTACAAGCTTGTTGT
ACTTGGATCTGGTGGTGTCGGAAAAAGTGCACTTACTGTCCAGTTTGTACAAGGTATATT
TGTTGAAAAGTATGATCCAACTATAGAAGACAGTTATCGAAAACAAGTAGAAACAGACAA
CCAACAATGTATGCTAGAAATTCTCGACACAGCTGGAACGGAACAATTTACAGCTATGAG
AGACTTATACATGAAAAATGGGCAGGGATTTGTTCTTGTATACAGCATCATTTCACAATC
TTCATTTGGTGATCTTCAGGATTTAAGGGAACAAATATTGAGAGTTAAAGACACAGATGA
TGTACCAATGATACTTGTAGGAAATAAATGTGATTTAGAAGAAGAAAGGGTGGTAGGAAA
AGATCAAGGAGCATCCCTTGCAAGGCAATGGGGAAATTGTGCGTTTTTGGAGACTTCTGC
CAAACAAAAAATCAATGTCAACGAGACACTACACATTCCA

InterProScan

ProSiteProfiles	Small_GTPase_Ras (IPR020849) - T[1-161] 41.638
PANTHER	Small_GTPase_Ras (IPR020849) - T[1-158] 6.8E-98
TIGRFAM	Small_GTP-bd_dom (IPR005225) - T[1-156] 1.9E-32
SUPERFAMILY	P-loop_NTPase (IPR027417) - T[2-158] 8.39E-51
Pfam	Small_GTPase (IPR001806) - T[5-158] 2.5E-54

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
RAP1B_HUMAN	89.308 %	296	1.0E-104
RAP1A_HUMAN	88.679 %	293	2.71E-103
RP1BL_HUMAN	88.05 %	292	5.98E-103