Aniseed - Transcript Card

Transcript 'Moocci.CG.ELv1_2.S47...'

Transcript Model

Transcript Id

Moocci.CG.ELv1_2.S476517.g16555.01.t

Possible name(s)

TUBB; TUBB2B; TUBB4B

Gene model

Moocci.CG.ELv1_2.S476517.g16555

Location

S476517 [8,063 / 8,762]

Sequences

Amino acid sequence

Length: 233

>Moocci.CG.ELv1_2.S476517.g16555.01.p
MNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYG
DLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFIPGFAPLTSRGSQQYRA
LTVPELTSQMFDAKNMMAACDPRHGRYLTVATIFRGRMSMKEVDEQMLNVQNKNSSYFVE
WIPNNVKTAVCDIPPRGLKMSGTFIGNSTAIQELFKRVSEQFTAMFRRKAFLH

Nucleotide sequence

Length: 699

>Moocci.CG.ELv1_2.S476517.g16555.01.t
ATGAACACTTTCAGCGTTGTTCCGTCACCAAAAGTATCTGACACCGTTGTTGAACCATAC
AATGCCACACTCTCAGTCCATCAACTGGTCGAAAACACAGACGAAACCTATTGTATTGAT
AATGAAGCCCTTTACGATATTTGCTTCCGTACTCTCAAACTTACTACCCCAACTTACGGT
GATCTTAACCATCTTGTATCCGCCACCATGAGCGGTGTAACCACCTGCCTGCGTTTCCCA
GGTCAACTCAACGCTGATTTACGAAAACTGGCCGTTAACATGGTTCCCTTCCCCCGTCTT
CACTTCTTTATTCCTGGATTTGCTCCACTCACCAGTAGAGGAAGCCAACAATACAGAGCT
CTAACCGTACCGGAATTGACTTCTCAAATGTTTGACGCCAAGAACATGATGGCTGCATGC
GACCCACGACACGGCCGCTATCTCACTGTTGCCACAATTTTCCGTGGTCGCATGTCCATG
AAGGAAGTTGATGAACAAATGTTGAACGTACAAAACAAGAACAGTTCATACTTTGTTGAA
TGGATTCCAAACAACGTAAAGACGGCTGTCTGTGACATTCCTCCGCGTGGTTTGAAGATG
TCAGGCACTTTCATAGGGAACAGCACAGCTATCCAGGAGTTATTTAAAAGAGTATCAGAG
CAATTCACCGCTATGTTTCGACGAAAAGCTTTCTTACAC

InterProScan

PANTHER	Tubulin (IPR000217) - T[1-233] 6.0E-189
PANTHER	Beta_tubulin (IPR002453) - T[1-233] 6.0E-189
Gene3D	Tubulin/FtsZ_GTPase_sf (IPR036525) - T[1-100] 1.5E-38
Pfam	Tubulin_FtsZ_GTPase (IPR003008) - T[2-48] 7.6E-10
SUPERFAMILY	Tubulin/FtsZ_GTPase_sf (IPR036525) - T[2-80] 2.49E-26
PRINTS	Tubulin (IPR000217) - T[13-26] 8.9E-30 - T[27-47] 8.9E-30 - T[207-233] 8.9E-30
PRINTS	Beta_tubulin (IPR002453) - T[49-61] 8.5E-75 - T[67-76] 8.5E-75 - T[82-95] 8.5E-75 - T[102-118] 8.5E-75 - T[148-166] 8.5E-75 - T[166-180] 8.5E-75 - T[184-207] 8.5E-75 - T[214-225] 8.5E-75
SUPERFAMILY	Tub_FtsZ_C (IPR008280) - T[81-233] 3.97E-67
SMART	Tubulin/FtsZ_2-layer-sand-dom (IPR018316) - T[83-220] 4.1E-49
Pfam	Tubulin/FtsZ_2-layer-sand-dom (IPR018316) - T[98-218] 7.0E-43
Gene3D	Tubulin/FtsZ_C_sf (IPR037103) - T[101-210] 5.5E-57
Gene3D	Tubulin_C (IPR023123) - T[211-233] 5.6E-8

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
TBB4B_HUMAN	97.425 %	484	1.95E-173
TBB2B_HUMAN	96.996 %	482	1.06E-172
TBB5_HUMAN	96.567 %	479	9.98E-172