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  1. Transcript 'Moocul.CG.ELv1_2.S59...'
  2. Region 'REG00000681'
  3. Transcript 'Cisavi.CG.ENS81.R16....'
  4. Clone 'cien47934'
  5. Transcript 'Moocci.CG.ELv1_2.S47...'

Transcript Model

Transcript Id

Moocci.CG.ELv1_2.S477787.g16676.01.t

Possible name(s)

GAPVD1; RABGEF1; RIN3

Location

S477787 [941 / 12,846]

Sequences

Amino acid sequence

Length: 617

>Moocci.CG.ELv1_2.S477787.g16676.01.p
MASEIIRDSSRKGIHVDQSKLLCKKGCGFYGNSAWQGYCSKCWREETAKQRDDQIESDHE
FAKKLQEMENRAVSEARARLPSPASSPANLANLEVPAPSPQSLQNTPESSSNTLNSLSPF
SRFEDKRSQTSRFRTKNLRKIFSSGGGSHEEPPATSPQHQHKTPTTSTKKSSPSSLRRML
KSRTHEFPWSGPERQQSFESRQASQDFLEFIKAFNEPAAKDVMLQCRHFMEKLVENKYLK
IEDQSELVQDFYHEMAQRLSSHQVFRHYSSEKDHERIMDNIEKFLMTRLYRNIFCNEQTD
DEQQDLALQTKIRNLHWVTTPMLDAEFKETISTVAIGIEKAITAIIEMDSKRAPQDKLNC
ITRCSKHIFEALQESKDAPASADEFLPALIYIVLKANPPLLKSNIHYITRFSNPGRLQAG
EDAYYFTNLCCAVEFIETGLNAHSLSLTEEEYDAYMNGRIPKTKNILDGPRLSEREKNTC
PGLELMYRNLNELASLHKSPLPSKFKTKTTSYLNDLHTYIRVDHLFTEAIAIQKNMDLHA
QYISEEVDKELAKPFPNMEGWEIISDEDEKLKNPQTSNSTPDVSSRTRKNHVTPTLSAMD
MAITDTLPPPLLPAPSQ

Nucleotide sequence

Length: 2,241

>Moocci.CG.ELv1_2.S477787.g16676.01.t
TCAAGTTTTAGCTAAGTATCTGGTATTTTATAGACTGATAGACTTTTTTAAATGCTATCG
TAAGTTTAAAATATTTAGAAAGAATTTTTCGTGAAGACTGAAGAGGAATTAACGAATTGC
TGTACCTGTAACTGTGTAAGCAGTTGTAAGCAATAAGTACCATACAGCAATAACAGAAAT
GGCTTCAGAAATTATTAGGGATTCTTCAAGAAAGGGAATTCATGTAGATCAAAGCAAACT
TCTTTGTAAAAAGGGATGTGGATTTTATGGAAATTCAGCATGGCAGGGATATTGTTCTAA
ATGTTGGAGGGAAGAAACTGCAAAACAGAGAGACGATCAAATTGAAAGTGACCATGAATT
TGCGAAGAAATTACAGGAGATGGAAAATCGAGCAGTCTCAGAAGCTAGAGCCCGACTTCC
ATCACCAGCTTCATCTCCGGCGAACTTAGCTAATTTAGAAGTACCAGCACCATCTCCACA
AAGTTTGCAAAACACTCCTGAAAGTTCATCAAATACTTTGAATTCATTAAGTCCATTTTC
AAGATTTGAAGACAAACGTTCACAAACCAGCAGATTTAGAACAAAAAATTTACGAAAAAT
ATTTTCTTCCGGAGGAGGTTCTCATGAAGAACCCCCAGCAACTAGTCCTCAACATCAACA
TAAAACTCCGACAACATCAACTAAAAAATCATCGCCATCATCTCTACGAAGAATGCTAAA
GTCACGTACACATGAATTTCCATGGTCAGGGCCTGAACGTCAACAAAGCTTTGAGAGTCG
TCAAGCGTCCCAAGATTTTCTCGAGTTTATAAAAGCCTTTAATGAACCTGCAGCTAAAGA
TGTTATGTTACAGTGTCGACATTTTATGGAAAAGCTTGTAGAAAATAAGTACTTGAAAAT
TGAAGACCAATCCGAATTGGTTCAAGATTTTTATCATGAGATGGCACAAAGGTTAAGTTC
GCATCAAGTTTTTCGTCATTACTCATCCGAAAAAGATCACGAGAGGATAATGGATAATAT
TGAGAAGTTTTTGATGACTCGTCTGTACCGAAATATTTTCTGTAACGAACAAACTGATGA
TGAACAGCAAGACTTAGCGCTGCAGACCAAAATTCGAAATTTACACTGGGTGACTACGCC
AATGTTAGATGCTGAGTTTAAAGAAACTATTTCCACAGTTGCAATTGGGATTGAAAAGGC
AATTACAGCAATAATTGAAATGGATTCGAAACGAGCCCCGCAAGACAAATTAAACTGCAT
TACGAGGTGCAGCAAGCATATATTTGAAGCCCTACAGGAATCCAAGGACGCTCCAGCGAG
TGCGGATGAATTTCTACCTGCGTTGATATACATCGTATTAAAAGCAAATCCACCACTCCT
TAAATCCAACATTCACTACATAACCAGGTTTTCGAACCCTGGCAGGTTGCAAGCTGGTGA
AGACGCGTATTATTTTACTAATTTGTGCTGTGCAGTTGAATTTATTGAAACCGGTCTAAA
CGCTCATAGCTTGTCATTAACGGAAGAAGAATATGACGCTTATATGAATGGAAGAATTCC
AAAAACAAAGAATATTCTAGATGGACCACGCCTTTCAGAACGTGAGAAAAACACTTGTCC
AGGACTTGAACTAATGTATAGAAATTTGAATGAACTTGCTTCATTGCACAAAAGTCCATT
ACCAAGTAAATTCAAAACAAAAACGACTTCTTATCTCAATGATTTGCACACATATATTAG
GGTGGACCACTTATTCACTGAGGCGATAGCAATACAAAAAAACATGGACTTACATGCGCA
GTATATATCAGAAGAAGTTGACAAAGAACTTGCTAAACCTTTTCCAAATATGGAAGGCTG
GGAAATAATTTCTGATGAAGACGAAAAACTTAAGAACCCCCAAACCTCAAATTCAACACC
TGACGTTTCTTCAAGAACTAGAAAGAATCATGTTACCCCCACATTGTCGGCAATGGACAT
GGCCATTACAGATACGCTTCCACCCCCTTTATTGCCCGCTCCTAGCCAATAGGTCAATAC
TTCATTTTATTTAATTCTTGTTTAAGTTATGTTGTTTAAATTGTATTCACAATGCAACAA
TGTTTATAACAATAAAGGACATATGCTGAGTTATTTTGGGTAAGTTTTTTGCTATTTTGG
CACCCAAAATTAATTTATACTACTTTGGTCAAGAATCATGGATTAAAGACCATGATTGGG
TATAAAATTCATAATTCGATA

InterProScan

ProSiteProfiles
Znf_A20 (IPR002653) - T[17-51] 10.246
SMART
Znf_A20 (IPR002653) - T[20-44] 4.0E-10
Pfam
Znf_A20 (IPR002653) - T[21-44] 2.2E-12
SUPERFAMILY
VPS9_dom_sf (IPR037191) - T[202-457] 9.42E-68
Gene3D
VPS9_dom_sf (IPR037191) - T[298-466] 6.5E-62
ProSiteProfiles
VPS9 (IPR003123) - T[302-445] 36.165
SMART
VPS9 (IPR003123) - T[335-454] 4.4E-23
Pfam
VPS9 (IPR003123) - T[339-438] 5.1E-28

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
GAPD1_HUMAN 26.977 % 86.7 1.82E-17
RABX5_HUMAN 41.682 % 379 8.98E-123





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