- Transcript 'Moocci.CG.ELv1_2.S47...'
Transcript Model
Transcript Id
Moocci.CG.ELv1_2.S477787.g16676.02.t
Possible name(s)
GAPVD1; RABGEF1; RIN3
Gene model
Location
S477787 [941 / 12,846]
Amino acid sequence
Length: 595
>Moocci.CG.ELv1_2.S477787.g16676.02.p
MASEIIRDSSRKGIHVDQSKLLCKKGCGFYGNSAWQGYCSKCWREETAKQRDDQIESDHE
FAKKLQEMENRAVSEARARLPSPASSPANLANLEVPAPSPQSLQNTPESSSNTLNSLSPF
SRFEDKRSQTSRFRTKNLRKIFSSGGGSHEEPPATSPQHQHKTPTTSTKKSSPSSLRRML
KSRTHEFPWSGPERQQSFESRQASQDFLEFIKAFNEPAAKDVMLQCRHFMEKLVENKYLK
IEDQSELVQDFYHEMAQRLSSHQVFRHYSSEKDHERIMDNIEKFLMTRLYRNIFCNEQTD
DEQQDLALQTKIRNLHWVTTPMLDAEFKETISTVAIGIEKAITAIIEMDSKRAPQDKLNC
ITRCSKHIFEALQESKDAPASADEFLPALIYIVLKANPPLLKSNIHYITRFSNPGRLQAG
EDAYYFTNLCCAVEFIETGLNAHSLSLTEEEYDAYMNGRIPKTKNILDGPRLSEREKNTC
PGLELMYRNLNELASLHKRVDHLFTEAIAIQKNMDLHAQYISEEVDKELAKPFPNMEGWE
IISDEDEKLKNPQTSNSTPDVSSRTRKNHVTPTLSAMDMAITDTLPPPLLPAPSQ
Nucleotide sequence
Length: 2,175
>Moocci.CG.ELv1_2.S477787.g16676.02.t
TCAAGTTTTAGCTAAGTATCTGGTATTTTATAGACTGATAGACTTTTTTAAATGCTATCG
TAAGTTTAAAATATTTAGAAAGAATTTTTCGTGAAGACTGAAGAGGAATTAACGAATTGC
TGTACCTGTAACTGTGTAAGCAGTTGTAAGCAATAAGTACCATACAGCAATAACAGAAAT
GGCTTCAGAAATTATTAGGGATTCTTCAAGAAAGGGAATTCATGTAGATCAAAGCAAACT
TCTTTGTAAAAAGGGATGTGGATTTTATGGAAATTCAGCATGGCAGGGATATTGTTCTAA
ATGTTGGAGGGAAGAAACTGCAAAACAGAGAGACGATCAAATTGAAAGTGACCATGAATT
TGCGAAGAAATTACAGGAGATGGAAAATCGAGCAGTCTCAGAAGCTAGAGCCCGACTTCC
ATCACCAGCTTCATCTCCGGCGAACTTAGCTAATTTAGAAGTACCAGCACCATCTCCACA
AAGTTTGCAAAACACTCCTGAAAGTTCATCAAATACTTTGAATTCATTAAGTCCATTTTC
AAGATTTGAAGACAAACGTTCACAAACCAGCAGATTTAGAACAAAAAATTTACGAAAAAT
ATTTTCTTCCGGAGGAGGTTCTCATGAAGAACCCCCAGCAACTAGTCCTCAACATCAACA
TAAAACTCCGACAACATCAACTAAAAAATCATCGCCATCATCTCTACGAAGAATGCTAAA
GTCACGTACACATGAATTTCCATGGTCAGGGCCTGAACGTCAACAAAGCTTTGAGAGTCG
TCAAGCGTCCCAAGATTTTCTCGAGTTTATAAAAGCCTTTAATGAACCTGCAGCTAAAGA
TGTTATGTTACAGTGTCGACATTTTATGGAAAAGCTTGTAGAAAATAAGTACTTGAAAAT
TGAAGACCAATCCGAATTGGTTCAAGATTTTTATCATGAGATGGCACAAAGGTTAAGTTC
GCATCAAGTTTTTCGTCATTACTCATCCGAAAAAGATCACGAGAGGATAATGGATAATAT
TGAGAAGTTTTTGATGACTCGTCTGTACCGAAATATTTTCTGTAACGAACAAACTGATGA
TGAACAGCAAGACTTAGCGCTGCAGACCAAAATTCGAAATTTACACTGGGTGACTACGCC
AATGTTAGATGCTGAGTTTAAAGAAACTATTTCCACAGTTGCAATTGGGATTGAAAAGGC
AATTACAGCAATAATTGAAATGGATTCGAAACGAGCCCCGCAAGACAAATTAAACTGCAT
TACGAGGTGCAGCAAGCATATATTTGAAGCCCTACAGGAATCCAAGGACGCTCCAGCGAG
TGCGGATGAATTTCTACCTGCGTTGATATACATCGTATTAAAAGCAAATCCACCACTCCT
TAAATCCAACATTCACTACATAACCAGGTTTTCGAACCCTGGCAGGTTGCAAGCTGGTGA
AGACGCGTATTATTTTACTAATTTGTGCTGTGCAGTTGAATTTATTGAAACCGGTCTAAA
CGCTCATAGCTTGTCATTAACGGAAGAAGAATATGACGCTTATATGAATGGAAGAATTCC
AAAAACAAAGAATATTCTAGATGGACCACGCCTTTCAGAACGTGAGAAAAACACTTGTCC
AGGACTTGAACTAATGTATAGAAATTTGAATGAACTTGCTTCATTGCACAAAAGGGTGGA
CCACTTATTCACTGAGGCGATAGCAATACAAAAAAACATGGACTTACATGCGCAGTATAT
ATCAGAAGAAGTTGACAAAGAACTTGCTAAACCTTTTCCAAATATGGAAGGCTGGGAAAT
AATTTCTGATGAAGACGAAAAACTTAAGAACCCCCAAACCTCAAATTCAACACCTGACGT
TTCTTCAAGAACTAGAAAGAATCATGTTACCCCCACATTGTCGGCAATGGACATGGCCAT
TACAGATACGCTTCCACCCCCTTTATTGCCCGCTCCTAGCCAATAGGTCAATACTTCATT
TTATTTAATTCTTGTTTAAGTTATGTTGTTTAAATTGTATTCACAATGCAACAATGTTTA
TAACAATAAAGGACATATGCTGAGTTATTTTGGGTAAGTTTTTTGCTATTTTGGCACCCA
AAATTAATTTATACTACTTTGGTCAAGAATCATGGATTAAAGACCATGATTGGGTATAAA
ATTCATAATTCGATA
| ProSiteProfiles |
Znf_A20 (IPR002653) - T[17-51] 10.246 |
| SMART |
Znf_A20 (IPR002653) - T[20-44] 4.0E-10 |
| Pfam |
Znf_A20 (IPR002653) - T[21-44] 2.1E-12 |
| SUPERFAMILY |
VPS9_dom_sf (IPR037191) - T[202-457] 8.63E-68 |
| Gene3D |
VPS9_dom_sf (IPR037191) - T[298-466] 6.1E-62 |
| ProSiteProfiles |
VPS9 (IPR003123) - T[302-445] 36.165 |
| SMART |
VPS9 (IPR003123) - T[335-454] 4.4E-23 |
| Pfam |
VPS9 (IPR003123) - T[339-438] 4.8E-28 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| GAPD1_HUMAN | 26.977 % | 86.3 | 1.84E-17 |
| RABX5_HUMAN | 40.489 % | 389 | 3.03E-127 |