Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Clone 'cign062k16' > 
  2. Clone 'cilv042e23' > 
  3. Clone 'ciad073i04' > 
  4. Clone 'cien158986' > 
  5. Transcript 'Moocci.CG.ELv1_2.S47...'

Transcript Model

Transcript Id

Moocci.CG.ELv1_2.S478539.g16773.01.t

Possible name(s)

AC011530.1; DMWD; WDR20

Gene model

Moocci.CG.ELv1_2.S478539.g16773

Location

S478539 [4,480 / 11,374]

Sequences

Amino acid sequence

Length: 523

>Moocci.CG.ELv1_2.S478539.g16773.01.p
MSFALNKVAFQVSLRSLFSLNCLRISDRMIETSRTTCVRWLPGSDSFLIASHTNGHMYCY
DVTKENVNVVPHYHEKPHKTTDGIRMFTTKHKQYTLPQSQVMTFQPNPVFKWHVTSDNSA
VHHFEFSHDGCNIALVTQEGYLRIVEYTDCETLGSMKSYFGGLLCCSWSPDDRYVVTGGE
DDLVTVWSFHDRTIIARGYGHKSYVSDVAFDHYTCLIPSEQEFVKWFGDAVPTKKTEISS
KHASNNKRHGFLAARVLKNLTSGDTDKNDKSDSDSVTNLNHKQELNGGLSVTSGSINMPH
VVYRFGSVGQDAQLCLWELTEDILYSRRRSGTVLGGFGSMHGKMHRPRSGRSLENHKQNN
EGSEWATTHTTQYRKSSHISENKNSTSTKDIEHAPSRQNIFSHLSSKSESNAIAPLTTGK
FATIGTRDQKKENREHKRNLSLPHFHSAKNSSGDTLKHDNNKKKEEQVANLFGTPLCPHL
EDTVMLEPLICKRISHGRLTGICFHEESFVIASQEVPTYSAIE

Nucleotide sequence

Length: 1,572

>Moocci.CG.ELv1_2.S478539.g16773.01.t
ATGTCGTTTGCTTTAAACAAAGTTGCTTTCCAGGTTTCACTACGCTCACTTTTTTCGCTA
AACTGCCTCAGAATATCTGATAGAATGATTGAAACATCTCGGACGACATGTGTTAGGTGG
TTGCCTGGTAGCGACTCTTTCTTAATTGCATCTCATACAAATGGCCACATGTACTGCTAT
GATGTAACTAAGGAAAATGTTAACGTTGTTCCTCACTACCATGAAAAGCCACATAAAACA
ACTGACGGTATTCGCATGTTTACAACAAAACATAAGCAATACACATTACCTCAAAGTCAA
GTCATGACATTTCAACCCAACCCAGTTTTTAAGTGGCATGTAACAAGTGACAACTCTGCT
GTACATCATTTTGAATTTTCACATGATGGATGTAATATTGCCCTGGTAACACAGGAAGGT
TACTTGCGAATTGTAGAATATACAGACTGTGAAACATTAGGTTCAATGAAAAGTTATTTT
GGTGGTTTATTGTGTTGTTCATGGAGCCCTGATGACCGCTATGTTGTTACTGGTGGGGAA
GACGATCTTGTCACTGTATGGTCATTTCATGACCGAACAATAATTGCCCGTGGTTATGGA
CATAAATCTTATGTTAGTGATGTAGCATTCGATCATTATACCTGTTTAATTCCATCTGAA
CAAGAGTTCGTAAAATGGTTTGGAGATGCGGTGCCAACAAAAAAGACTGAAATATCATCA
AAACATGCCAGTAATAATAAACGGCATGGCTTTTTAGCTGCAAGGGTTTTAAAAAACTTA
ACATCTGGTGACACAGATAAAAATGATAAATCAGACTCTGATAGTGTAACAAATTTAAAT
CATAAACAAGAACTGAATGGAGGTTTAAGTGTTACAAGTGGTTCAATTAATATGCCTCAT
GTGGTGTATAGATTTGGTTCGGTCGGTCAAGATGCGCAGCTTTGTTTATGGGAATTAACA
GAGGATATTCTTTACTCACGACGGAGAAGCGGAACTGTATTGGGTGGATTTGGGAGTATG
CATGGAAAAATGCATAGACCAAGGTCGGGTCGATCTTTAGAAAACCACAAACAAAATAAT
GAAGGCTCGGAATGGGCTACAACACACACCACTCAATACAGGAAGAGTTCCCATATCAGT
GAAAATAAAAATTCAACATCAACTAAAGATATTGAACATGCCCCATCACGTCAAAACATT
TTTTCACATTTATCGTCTAAAAGTGAAAGTAATGCAATAGCGCCCTTAACAACAGGTAAA
TTTGCAACTATAGGAACTCGTGACCAAAAGAAGGAAAATCGAGAACACAAACGCAACTTG
AGTCTGCCACATTTTCACAGCGCAAAAAACTCCAGTGGCGACACGCTAAAACATGACAAC
AATAAAAAGAAAGAAGAACAGGTTGCGAATCTTTTCGGAACACCACTGTGCCCCCATCTG
GAAGACACTGTAATGTTAGAGCCACTTATTTGCAAGCGGATATCACACGGGAGGTTAACA
GGAATCTGTTTTCACGAAGAAAGTTTTGTTATTGCTTCACAAGAAGTACCTACATATAGC
GCTATTGAATGA

InterProScan

SMART
WD40_repeat (IPR001680) - T[19-61] 9.0 - T[105-146] 48.0 - T[149-188] 3.0E-4
SUPERFAMILY
WD40_repeat_dom_sf (IPR036322) - T[32-74] 2.04E-23 - T[110-213] 2.04E-23
ProSiteProfiles
WD40_repeat_dom (IPR017986) - T[114-211] 12.552
ProSiteProfiles
WD40_repeat (IPR001680) - T[156-197] 10.976

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
WDR20_HUMAN 37.271 % 268 3.29E-83
DMWD_HUMAN 44.92 % 168 4.3E-45