- Transcript 'Moocci.CG.ELv1_2.S48...'
Transcript Model
Transcript Id
Moocci.CG.ELv1_2.S486072.g17564.01.t
Possible name(s)
NVL; SPATA5; VCP
Gene model
Location
S486072 [12,388 / 14,920]
Amino acid sequence
Length: 843
>Moocci.CG.ELv1_2.S486072.g17564.01.p
MSYLPSYDKRLVARITKYVSEHRFVDCGVMASDLQIQYHTEYGRRKKNAFKKLVSLIYES
LNGNKRISLNQIENKHKVKRLKEANKTNVENKSDSEELVEYPDTNLINDSLSSMYNGDVS
SLSMPVKLSPTQMSHSFDQPVKNRVEKWYDSNNSQSKAENGINGNINLDFETINELNDAT
TPLKNLPDKQENKKKPGKSKKDGTKKSLKSESLSDELNDFRKKKYIFESSKVKFENVGGN
NKTLQEVCKLLIHMKHPEVYQALGVSPPHGVLLHGPPGCGKSLLANAIAGEMELPMLKMA
ATEIVSGVSGDSEQKLRDIFEVAVENSPCIIFLDEIDAIAPKRETASKEMERRIVAQLLS
CMDDMNSSLSQILIIGATNRPDSLDPALRRAGRFDKEIAMGIPDENARKDILRVLCKDLK
LEKDFNFAMVARLTPGYVGADLLSLCREAATITVSNVLMYKNLPKHGHDEMDISDNIEIS
QEQTINKQIIDLNNDNMIHKNSYAKETIESDNKVFQMLSWLRNSKNFTEDELAKLCITMT
DFEKALKVVQPSAKREGFATVPDVTWADIGALETIREELSVSILAPVRNPDAFKALGLVK
PPGVLLVGPPGCGKTMLAKAIANESGLNFISVKGPELLNMYVGESERAVRQCFQRAQNSS
PCVIFFDELDSLCPKRSGMDTGSSARVVNQMLTEMDGLEARKQVFVMAATNRPDIIDPAI
LRPGRLDKSLFVDLPSKEDRFKILMAITKDGTKPKIASDLSLQDVANDSRCDRFTGADLS
ALIREASVNALKKYISQQHVLNPVNTTTVFVNGDNFENAFAKVKPSVSIKDQEKYLKLKN
ICQ
Nucleotide sequence
Length: 2,532
>Moocci.CG.ELv1_2.S486072.g17564.01.t
ATGTCTTATTTACCATCTTACGATAAGCGTTTAGTGGCGAGAATAACAAAATATGTATCT
GAACATCGTTTTGTAGACTGCGGAGTAATGGCATCTGATTTGCAAATACAATACCACACC
GAATACGGAAGAAGAAAAAAGAATGCATTTAAGAAACTGGTCTCTTTAATTTATGAATCC
CTTAATGGCAATAAACGTATTTCTTTAAATCAAATAGAAAACAAGCACAAGGTAAAAAGA
CTAAAAGAAGCAAATAAAACAAATGTCGAAAATAAGTCTGATTCTGAGGAATTGGTTGAA
TACCCAGATACAAACTTGATCAATGACTCTTTATCTTCTATGTATAATGGAGATGTTTCT
AGTTTAAGCATGCCTGTAAAATTATCTCCGACTCAAATGTCACATTCATTTGATCAACCT
GTGAAAAACAGAGTGGAAAAATGGTATGACAGTAACAATAGTCAAAGTAAAGCTGAAAAT
GGAATCAATGGTAATATTAATTTGGACTTTGAAACAATTAATGAATTAAATGATGCAACC
ACGCCATTAAAAAATTTACCTGATAAACAAGAAAACAAAAAGAAACCTGGAAAAAGTAAA
AAAGACGGAACAAAAAAATCACTTAAATCTGAAAGTTTAAGCGATGAATTAAATGATTTT
CGTAAGAAAAAATATATTTTTGAAAGTAGTAAAGTAAAATTTGAAAATGTAGGCGGAAAC
AACAAAACACTGCAGGAAGTTTGTAAGCTCCTAATACATATGAAACACCCGGAGGTTTAT
CAAGCTCTTGGTGTGTCGCCTCCTCACGGTGTTCTACTTCATGGGCCCCCAGGTTGTGGC
AAAAGTCTTTTGGCAAATGCAATTGCAGGTGAAATGGAGCTTCCAATGCTTAAAATGGCT
GCCACAGAAATTGTAAGTGGTGTTTCGGGTGACAGCGAACAAAAACTACGAGATATATTT
GAAGTAGCAGTTGAAAATTCTCCCTGTATAATATTTTTAGATGAGATTGATGCAATAGCA
CCTAAAAGAGAAACTGCTTCAAAAGAAATGGAACGGCGGATTGTAGCCCAATTACTGTCA
TGCATGGATGATATGAATTCATCTTTGTCACAAATCCTTATTATTGGTGCAACTAATCGT
CCCGATTCTTTGGACCCTGCACTGCGAAGAGCAGGAAGATTTGATAAAGAAATTGCAATG
GGTATACCTGATGAAAACGCAAGAAAAGATATTTTGAGAGTGTTGTGTAAAGATTTAAAA
TTGGAGAAAGACTTTAATTTTGCCATGGTTGCTCGTTTAACACCAGGTTACGTTGGTGCA
GACTTGCTATCACTGTGTAGGGAAGCTGCTACTATTACAGTATCCAATGTGCTGATGTAT
AAAAATTTGCCTAAACACGGTCATGATGAAATGGACATATCTGATAACATAGAAATTTCA
CAAGAACAAACTATAAACAAACAAATCATAGACTTAAACAATGATAATATGATCCACAAA
AATTCTTATGCAAAAGAAACAATAGAATCAGATAATAAAGTGTTTCAAATGTTGTCATGG
TTAAGGAACTCTAAAAATTTCACTGAAGATGAACTGGCAAAATTATGCATTACAATGACT
GATTTTGAAAAAGCACTTAAGGTTGTTCAACCTTCTGCAAAAAGAGAGGGGTTCGCTACA
GTACCAGATGTAACTTGGGCCGACATTGGTGCATTAGAAACTATACGAGAGGAGTTGAGT
GTCTCCATTCTTGCCCCAGTTCGTAACCCTGACGCATTTAAAGCTTTAGGTCTTGTAAAA
CCACCTGGGGTTTTGCTTGTTGGTCCTCCAGGGTGTGGAAAAACTATGTTGGCAAAAGCA
ATTGCAAATGAATCTGGTTTGAATTTTATATCTGTAAAAGGTCCAGAGCTGTTAAATATG
TATGTAGGAGAAAGTGAAAGAGCAGTAAGGCAGTGTTTTCAAAGGGCACAAAATTCCAGC
CCTTGTGTAATATTTTTTGATGAATTAGATTCATTATGTCCAAAACGAAGTGGAATGGAC
ACAGGTTCTTCTGCCAGAGTTGTCAATCAAATGCTGACAGAAATGGATGGTCTTGAAGCC
AGAAAGCAAGTTTTTGTAATGGCAGCAACAAATCGTCCTGATATAATCGACCCTGCGATA
TTGAGACCAGGCAGATTAGATAAAAGCCTTTTTGTTGATTTACCCAGTAAAGAAGACCGA
TTTAAAATACTAATGGCCATTACAAAGGATGGGACGAAACCTAAAATTGCAAGTGATCTT
TCTCTACAAGATGTGGCAAACGATTCAAGGTGTGATCGTTTTACAGGCGCAGATTTATCA
GCATTGATAAGGGAAGCGTCTGTAAACGCATTAAAAAAATATATCTCACAACAACATGTG
TTAAATCCTGTGAACACAACAACTGTTTTTGTCAATGGAGATAATTTTGAAAATGCATTT
GCTAAAGTTAAACCTTCAGTTTCGATAAAAGATCAAGAAAAATATCTTAAATTAAAAAAC
ATATGTCAATGA
| Gene3D |
NLV2_N_sf (IPR038100) - T[4-68] 1.3E-16 |
| Pfam |
NVL2_nucleolin-bd (IPR031996) - T[7-63] 3.1E-16 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[230-456] 7.0E-59 - T[562-840] 1.14E-65 |
| SMART |
AAA+_ATPase (IPR003593) - T[267-404] 2.1E-22 - T[600-736] 2.7E-22 |
| Pfam |
ATPase_AAA_core (IPR003959) - T[271-400] 1.0E-42 - T[604-733] 4.1E-47 |
| ProSitePatterns |
ATPase_AAA_CS (IPR003960) - T[372-390] . - T[704-722] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SPAT5_HUMAN | 38.54 % | 392 | 5.75E-123 |
| TERA_HUMAN | 42.781 % | 447 | 5.65E-145 |
| NVL_HUMAN | 52.583 % | 869 | 0 |