- Clone 'ma194h16' >
- Clone 'cima8101897' >
- Clone 'cien128328' >
- Clone 'cima86761' >
- Transcript 'Moocci.CG.ELv1_2.S48...'
Transcript Model
Transcript Id
Moocci.CG.ELv1_2.S487192.g17667.01.t
Possible name(s)
LGR4; LGR5; LGR6
Gene model
Location
S487192 [33,407 / 37,870]
Amino acid sequence
Length: 1,012
>Moocci.CG.ELv1_2.S487192.g17667.01.p
MYTCKYLTIIIIGIRQTPKIITYFRTLSDNPIRIIGRTAFMQLAHLETLNLENIHDQKMF
PNFDGCKSLTSLSLTGGKISEIPQNICSKLPSLVRLSVAGNQLTNFTGLGKCDNLTTLDV
SSNQLTQISVSDMFNLTKLQIIDLSDNKITKMEENVFVGPELLKINLAYNQFTLLPVKGL
RALRELNITGVQTMLYLPPKYSIPNLRKLSAFYPYHCCELTSSSRRDSMANSPHELDARN
MYPGSYIPQKPVTNMAPFIQCGPIPGPLHPCDNLLPTNALRGFGWITLLVTVVLNVFLLG
YFIARAHFARKYRPTANPVQSDTEGATFMGRVFMHDEEFGRSSSFNFVTCNMAVADLAIC
GYLGILLAYDARTLGEFSVYGAWWQQSPLCHGASFLLVFGTQLAFSSLVIMTLERYLATM
HPMDKDKQLRKTALFLTVAASWVFSSVTGTVTLFGGDAYNGKGILPSLSSATCLPWTTEF
KYILILISIHIMSCICASSLCLLMLCAKNKPTWQTYTRNTKWQTAFTFGLNTAIILPLGI
IALYISVVTTFPSAGNPGQVTSQDKRDIITGNSFVDMESILIFVLLVIPLRCVLNIGLYV
IFNKQFRVFLLNMVGIKSHTKHKFLMDSVQYSTEMYRTSHINESPNSYDERHYDTYTEST
GYDTSFSQYVEVRNGSHGVQSVLVPSENSFASRHSDVKPPIREYHQSSASKPLYFDDVIE
EVDDDASVDAKEEFQQIMCDAGEHMNSIDLLRSYQGIEGVDRPFDQRYPRTSSRNHSRYN
TRKNNDSSSTNSSQQRRRTPKLNQPTNHYDLSALNSYSSSSVHSRSKSSSLNRDVVSDST
ANDCDENGMYSPVIVAPNDNKNPILGDDSTLTQEQVIEYLPRHRDLEYPRAASGQQSDDK
NVIPDRKQRSSESYDSSKDSGIHSEVDSTSVASDAGDVQRVNLIVTSKRQLSTITTPNLT
RSYKDHLVDSDRTPLCSSPSNATLTDKNCNKLGYSNHKLNSKIPIHQHETAI
Nucleotide sequence
Length: 3,039
>Moocci.CG.ELv1_2.S487192.g17667.01.t
ATGTACACTTGTAAATATTTGACTATCATAATAATTGGTATACGACAAACCCCAAAAATA
ATAACATATTTTAGAACACTTTCGGACAACCCAATCCGAATCATTGGTAGAACAGCGTTT
ATGCAGCTCGCTCATTTGGAAACATTAAACCTTGAAAATATTCACGACCAAAAAATGTTC
CCAAACTTTGATGGATGCAAAAGCTTAACTTCATTATCTTTAACTGGAGGAAAAATAAGT
GAAATACCGCAAAATATATGCTCTAAATTGCCGTCTCTTGTGCGGCTTTCTGTTGCGGGA
AACCAGCTGACAAATTTTACTGGATTGGGAAAGTGTGACAATCTTACAACGCTAGATGTC
AGTAGCAATCAACTGACTCAAATATCAGTTTCTGATATGTTCAATTTAACAAAACTTCAA
ATAATTGACCTTAGCGACAACAAAATCACGAAAATGGAAGAGAATGTCTTCGTTGGACCA
GAGTTGTTAAAAATAAACCTTGCCTACAATCAGTTCACATTGTTACCTGTAAAAGGTCTT
AGGGCACTACGAGAACTCAATATAACCGGGGTCCAAACTATGTTGTATCTTCCGCCAAAA
TACAGCATTCCAAATTTGCGAAAACTGTCCGCGTTTTACCCGTACCACTGCTGTGAACTT
ACGTCATCATCCCGACGAGATTCAATGGCAAACTCACCACATGAATTGGATGCAAGAAAT
ATGTATCCTGGGTCTTATATTCCACAGAAACCAGTTACCAACATGGCTCCATTTATCCAG
TGTGGACCCATTCCTGGACCCCTTCACCCATGTGATAATTTATTACCCACCAATGCCCTG
CGAGGATTTGGATGGATTACACTGTTAGTTACTGTCGTTCTAAACGTGTTCTTGCTTGGA
TATTTTATAGCTAGAGCACACTTTGCTAGAAAATATCGACCCACTGCTAATCCAGTTCAG
TCTGACACTGAAGGAGCAACTTTTATGGGAAGAGTTTTTATGCATGATGAGGAGTTTGGA
AGAAGCAGCAGTTTTAATTTTGTAACTTGTAATATGGCAGTTGCTGATTTAGCGATTTGT
GGATATCTCGGGATTTTGCTTGCATATGATGCACGGACACTTGGAGAATTTTCCGTTTAT
GGAGCATGGTGGCAACAGTCTCCACTTTGCCATGGCGCGTCCTTTCTGCTTGTATTTGGA
ACTCAACTTGCTTTTTCGTCGTTAGTCATAATGACTCTAGAGCGCTATCTAGCGACCATG
CATCCAATGGACAAAGACAAGCAACTTCGAAAAACAGCTTTGTTTTTAACCGTAGCTGCT
TCATGGGTATTCTCCTCTGTCACTGGAACTGTGACGCTTTTTGGTGGGGATGCTTATAAC
GGAAAGGGCATATTACCATCTCTCAGTAGTGCAACATGTTTGCCATGGACGACAGAGTTT
AAATATATATTAATCCTAATCTCAATACATATAATGAGTTGCATATGCGCGTCATCATTA
TGTCTTCTTATGCTATGTGCGAAGAACAAGCCAACGTGGCAGACGTATACTAGAAACACA
AAATGGCAAACAGCGTTTACTTTTGGTCTCAATACAGCCATCATTTTGCCCCTTGGTATT
ATTGCCCTTTACATATCGGTAGTTACAACGTTCCCATCTGCTGGCAATCCAGGACAAGTC
ACATCACAAGACAAGAGGGATATCATCACTGGGAATTCATTCGTTGATATGGAAAGCATT
CTCATATTCGTACTGTTGGTTATACCACTAAGATGTGTCCTTAATATAGGATTGTATGTT
ATTTTCAACAAACAATTTAGAGTATTCCTGCTTAATATGGTTGGAATTAAAAGCCACACT
AAACATAAGTTTTTGATGGATAGCGTACAGTACAGTACAGAAATGTACAGGACATCTCAT
ATAAACGAGAGTCCAAATTCATACGATGAACGACATTATGACACATATACCGAATCAACA
GGATATGACACTTCATTTAGCCAGTATGTCGAAGTAAGAAATGGATCACATGGAGTTCAA
AGCGTTTTGGTTCCTAGTGAAAACTCATTTGCATCAAGGCATAGTGACGTCAAGCCTCCA
ATAAGAGAATACCACCAATCAAGCGCCTCAAAACCTTTATATTTTGATGACGTCATAGAA
GAAGTTGATGATGACGCAAGTGTTGACGCAAAAGAAGAATTCCAACAGATAATGTGCGAT
GCAGGAGAACATATGAACAGTATTGATTTGTTACGTTCATATCAAGGTATAGAGGGAGTA
GATCGACCGTTTGATCAAAGATATCCACGAACTAGTTCCAGAAATCATTCGCGTTATAAT
ACACGGAAAAATAACGATAGTAGTTCAACAAATTCAAGTCAACAGCGACGAAGAACGCCA
AAGTTAAACCAGCCAACAAATCATTACGACTTGTCCGCACTAAACTCTTACAGTAGCAGC
TCAGTTCACTCAAGGTCAAAATCAAGTTCGTTAAATCGTGACGTTGTTTCCGACTCAACA
GCGAACGATTGTGACGAAAATGGAATGTATAGTCCTGTTATTGTAGCCCCAAACGACAAC
AAAAATCCAATTCTTGGAGACGATTCAACCTTAACACAGGAGCAAGTAATCGAGTATTTA
CCGAGGCATCGAGACCTTGAATATCCGCGAGCCGCAAGTGGGCAACAGAGTGACGACAAA
AACGTAATTCCAGATCGTAAACAGCGATCCAGCGAGTCTTACGATTCGTCGAAAGACTCC
GGAATCCATTCGGAAGTCGATTCGACAAGCGTCGCATCCGATGCCGGCGATGTTCAAAGA
GTTAACTTGATAGTAACTTCGAAAAGACAATTATCTACCATAACAACGCCTAATTTAACG
CGATCTTATAAAGACCATTTAGTGGACTCGGATAGAACACCATTATGTTCGTCTCCATCT
AACGCAACCTTAACAGACAAAAATTGTAATAAACTCGGTTATTCGAACCATAAACTAAAT
AGCAAAATACCAATTCATCAACATGAAACTGCCATATGA
| Gene3D |
LRR_dom_sf (IPR032675) - T[15-281] 4.2E-46 |
| Pfam |
LRR_5 (IPR026906) - T[32-97] 0.025 |
| SMART |
Leu-rich_rpt_typical-subtyp (IPR003591) - T[66-89] 200.0 - T[90-112] 26.0 - T[114-135] 410.0 - T[136-159] 0.052 - T[160-182] 360.0 |
| ProSiteProfiles |
Leu-rich_rpt (IPR001611) - T[68-89] 6.11 - T[92-113] 6.249 - T[114-135] 7.427 - T[138-159] 7.258 |
| Pfam |
Leu-rich_rpt (IPR001611) - T[114-172] 4.2E-10 |
| ProSiteProfiles |
GPCR_Rhodpsn_7TM (IPR017452) - T[325-599] 13.029 |
| Pfam |
GPCR_Rhodpsn (IPR000276) - T[343-791] 2.2E-13 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| LGR6_HUMAN | 27.737 % | 150 | 5.3E-37 |
| LGR5_HUMAN | 24.841 % | 164 | 1.48E-41 |
| LGR4_HUMAN | 25.696 % | 159 | 7.07E-40 |