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TRANSCRIPT CARD

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  1. Region 'REG00000377' > 
  2. Transcript 'Moocci.CG.ELv1_2.S48...'

Transcript Model

Transcript Id

Moocci.CG.ELv1_2.S489514.g17920.01.t

Possible name(s)

TMED10; TMED4; TMED9

Gene model

Moocci.CG.ELv1_2.S489514.g17920

Location

S489514 [4,766 / 6,225]

Sequences

Amino acid sequence

Length: 218

>Moocci.CG.ELv1_2.S489514.g17920.01.p
MQCKMFSLLIVVMLLNSSLGLYFHVGEKEKKCFIEELPEDTMVTGKYRAQLWDKRSDKFL
DSTPGMGMHVEIKDPDDKIILSKSYGSEGAFTFTSHTPGEHQICIHSNSTKWSLFAGGKL
RVHLDIQVGEHTNDYSEIAAKDKLTELQLRVRQLLDQVQQIQKEQNYQRYREERFRATSE
STNSRVLWWSIAQTAVLVIAGMWQMRHLKGFFEAKKLV

Nucleotide sequence

Length: 1,270

>Moocci.CG.ELv1_2.S489514.g17920.01.t
GTTAACTTTAGTTGGTAACAGGTTTTTAAAATAGTCTGATAGTGTTAGAATCGTTTTAAA
AAATGCAGTGTAAAATGTTTTCGTTACTTATTGTTGTAATGCTTTTGAACTCATCTCTTG
GACTATATTTTCACGTTGGGGAAAAAGAGAAAAAATGTTTTATTGAAGAATTGCCAGAAG
ATACTATGGTAACTGGAAAATATAGAGCCCAACTTTGGGATAAAAGGTCCGATAAATTTC
TTGATTCCACACCTGGAATGGGAATGCATGTTGAAATAAAAGATCCAGATGATAAAATAA
TTCTATCTAAGAGTTACGGCTCTGAAGGAGCATTTACATTTACATCACACACTCCAGGAG
AACATCAGATCTGCATCCATTCAAATTCCACCAAATGGTCTTTGTTTGCAGGAGGTAAGC
TAAGAGTTCATCTTGATATTCAAGTCGGAGAGCACACAAATGACTACAGTGAAATTGCTG
CTAAGGACAAACTAACTGAGCTCCAATTACGTGTGCGACAGTTGTTGGACCAAGTGCAAC
AAATACAAAAGGAGCAAAACTACCAACGATACAGAGAAGAAAGGTTTAGGGCAACTAGCG
AAAGCACAAACTCCCGTGTTTTGTGGTGGTCTATTGCACAAACTGCAGTCTTAGTCATCG
CTGGAATGTGGCAAATGAGACATCTTAAAGGGTTCTTTGAAGCAAAGAAACTTGTATGAT
TTGCCTATTCAGCAGCATTTGAAAATTTTATGCACACATTAAACACACTGTTTTCAGGGG
ATTAATGTGTATATTTATTTGAACTTTACAAGCACTTTTAAAATTTTACTGTTCACAGAT
AAGTTAGCTTATTTAGGTTTTGAAAAATTTACAATTTTAGGGTGATTGATGTTTATAAAC
GGAAATTAAAACTTGTGCATTCTTAATAAATTCCAGAATATATATATTATATAAAAGTTT
GGATAGGCATGAATGGAATACAATACTTACAAACACTTATGTTTTGTTTATAGCCACTTT
TGTTTAATTTATTTATATTACTTCTCTGCTTGAAGTATTTATTTCTTAGGAAAGGTCTAA
CTCTGTTTTTAAAGGTCAACTAGAAGTTGAAAATACCTTTATCTAAAATGACTTAGATTA
ATAACCATTGTCAATAAATATTTCTGCAGTTTTTAAATTATAAGTACCGGTATCTCATTA
ACTAAACGGAAACAACTTGTTTTTAACTTTAGTTTAACAATTAGGTCCAAAAATAAACAA
AAAATCGTTT

InterProScan

PANTHER
TMP21-related (IPR015720) - T[5-218] 1.5E-123
SMART
GOLD_dom (IPR009038) - T[20-213] 7.4E-79
Pfam
GOLD_dom (IPR009038) - T[21-213] 4.3E-56
ProSiteProfiles
GOLD_dom (IPR009038) - T[30-151] 17.79

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
TMED9_HUMAN 73.832 % 345 3.09E-122
TMED4_HUMAN 78.392 % 351 1.82E-124
TMEDA_HUMAN 33.498 % 110 7.68E-30