- Clone 'ma313o09' >
- Transcript 'KH2012:KH.C12.696.v1...' >
- Clone 'AHC0AAA204YE19' >
- Clone 'cilv064l16' >
- Transcript 'Moocci.CG.ELv1_2.S48...'
Transcript Model
Transcript Id
Moocci.CG.ELv1_2.S489710.g17950.01.t
Possible name(s)
EDEM1; EDEM2; EDEM3
Gene model
Location
S489710 [23,159 / 25,207]
Amino acid sequence
Length: 196
>Moocci.CG.ELv1_2.S489710.g17950.01.p
MNILNLSTPQTVLKMSSGKTITHINGGYRNFSPSDIKYMKSEALRMFQFGYDNYMKYAYP
KDELDPIHCVGRGPDIDDPSNININDVLGNFSLTLVDSLDTLAIMGNSSEFKSAVKLVID
SVHFDKNSTVQVFETNIRILGSLLSAHLIIIDPRQPFGDMRPPGYDNELLNLAHDIAVRL
LPAFDSTPSGIPYPRV
Nucleotide sequence
Length: 591
>Moocci.CG.ELv1_2.S489710.g17950.01.t
ATGAATATTTTGAATCTATCAACTCCACAAACAGTTTTAAAGATGAGTTCTGGAAAAACT
ATTACTCATATAAACGGTGGTTACAGAAACTTTTCACCATCAGACATAAAGTATATGAAA
TCCGAAGCCCTGCGGATGTTTCAATTTGGGTATGACAATTACATGAAGTATGCGTATCCA
AAGGATGAGCTTGATCCCATTCACTGTGTTGGACGAGGACCAGATATTGACGATCCTTCA
AATATCAACATCAATGATGTTCTTGGCAACTTTTCGCTTACACTAGTTGATTCTTTGGAT
ACTTTAGCGATCATGGGAAACTCAAGTGAATTTAAAAGTGCTGTTAAACTTGTAATAGAT
TCTGTACATTTCGATAAAAACTCAACTGTTCAAGTATTTGAAACCAACATTCGAATCCTC
GGGTCTCTTCTTTCCGCTCATCTTATAATTATTGACCCTCGTCAGCCGTTCGGTGATATG
AGGCCTCCAGGGTATGACAATGAATTGTTGAATTTGGCCCATGACATTGCTGTTCGCTTG
TTACCTGCTTTTGATTCAACTCCAAGTGGAATACCGTACCCTCGAGTATGA
| Gene3D |
6hp_glycosidase-like_sf (IPR012341) - T[28-196] 4.0E-50 |
| SUPERFAMILY |
Seven-hairpin_glycosidases (IPR036026) - T[39-196] 3.79E-48 |
| Pfam |
Glyco_hydro_47 (IPR001382) - T[46-196] 1.6E-40 |
| PRINTS |
Glyco_hydro_47 (IPR001382) - T[46-66] 1.4E-27 - T[92-106] 1.4E-27 - T[129-147] 1.4E-27 - T[183-196] 1.4E-27 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| EDEM3_HUMAN | 43.275 % | 134 | 2.36E-36 |
| EDEM2_HUMAN | 41.916 % | 117 | 6.09E-31 |
| EDEM1_HUMAN | 71.687 % | 246 | 2.92E-78 |