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TRANSCRIPT CARD

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  1. Clone 'cima879348' > 
  2. Transcript 'Moocci.CG.ELv1_2.S65...' > 
  3. Transcript 'KH2012:KH.L117.1.v1....' > 
  4. Transcript 'Moocci.CG.ELv1_2.S49...'

Transcript Model

Transcript Id

Moocci.CG.ELv1_2.S491834.g18191.01.t

Possible name(s)

CIRBP; TRA2A; TRA2B

Gene model

Moocci.CG.ELv1_2.S491834.g18191

Location

S491834 [2,517 / 5,075]

Sequences

Amino acid sequence

Length: 258

>Moocci.CG.ELv1_2.S491834.g18191.01.p
MLYFENLNAGPVIILVHQGLVPDHTKGLAQKVEMVIDMVEVRLNMEEDQEVMTETAVIKE
GIPIPEVVRDHVVYHRCQEENDILEIGWMNPPTGRCLGVFGLSLYTTENDLRDVFSKYGY
IEKANIVIDQKTGRSRGFGFVYYDNTEDAVDAKDRANGMELDGRRIRVDFSITKRAHTPT
PGMYVGQPTPHYGPPRHSRYEGRGHGDRDRYDRGGGRYERDRGGHYDDYRERDRDRYRRS
PSPYYRRRSPSPYGRDRL

Nucleotide sequence

Length: 1,549

>Moocci.CG.ELv1_2.S491834.g18191.01.t
ATGCTGTATTTTGAAAATCTGAATGCGGGTCCAGTCATTATTTTGGTACACCAAGGTCTC
GTTCCCGATCATACAAAAGGTCTCGCTCAAAAAGTGGAGATGGTTATCGATATGGTGGAA
GTCCGTCTAAACATGGAAGAAGATCAAGAAGTTATGACAGAGACCGCCGTCATAAAAGAA
GGCATTCCTATTCCAGAAGTCGTTCGAGATCACGTAGTATATCACCGATGTCAGGAAGAA
AACGACATATTGGAGATAGGGTGGATGAACCCACCCACCGGAAGGTGTTTAGGAGTTTTT
GGTTTGAGTCTGTATACAACGGAAAATGATTTACGAGATGTATTTTCAAAATATGGATAT
ATTGAAAAAGCAAACATAGTTATTGACCAAAAGACTGGAAGATCAAGAGGCTTTGGCTTT
GTTTATTATGACAATACTGAAGATGCTGTAGATGCAAAAGATCGTGCAAATGGTATGGAA
TTGGATGGTAGGCGAATACGCGTTGATTTTTCTATTACTAAAAGAGCTCATACACCTACA
CCAGGGATGTACGTTGGACAACCAACCCCACACTATGGACCACCCCGCCACAGTCGCTAC
GAAGGTCGTGGTCATGGTGACCGAGACAGATATGATAGAGGTGGTGGTAGATATGAACGA
GATCGTGGGGGACATTATGATGATTACAGAGAACGTGATCGTGATAGATACAGACGTAGT
CCGTCACCATATTATCGTAGAAGGTCCCCTAGTCCGTATGGCAGAGATCGCTTGTAGTCA
TGAAATTTTTCAAGTCTGCTCAAATTTTACCTGAAAATCAGAAATGAAATTTTAGACAAG
AAAGAAAAATAGAAATTGAATGAGAAGCTTTATTAGAATGTTTGAAATGAAATGAAGTTT
CTTTCATTGTTGAAGCATGATAATGAAGTTGAAGCAGTAGTTTTGTGCTGTTTTAAAATG
AAATCAAATTCGCAAGCTAGAATCTGCATTGATAGTGGTTTGGGCTCATTGCATTGTTAA
ATAAAAAAACCAAATCAATCAGTATATTTAATATTTAGTTACATAGAGGCATTCGGTAAT
AATTTAATTAAATTCCAACTTATATTTTTTAATGTAATTTTAATTAGATTACAATATCAG
GTAAGTAATGTGATAATAATCATAAATTCTGACAAAGTTTAATAAGCATAAAAAAATAAA
ATACAATCTCATTAAAATGTTTTTATTATTTCAGGTCGCTATTGAGTAAAGAAGATACGA
AATCAAATCAGTGGAAATGTACTTTTTTGTTTTGTTTAAAAACTATAGCCCATTCAATTT
TTTCTTCTTTTGACTTTTCACGGACGTTTTTCTGAACAACCTCGAGATCGATATTAAAAT
TTGAATGAATGAATTGACTCTCTAGAAGATGTAAGGCTTACTTTTCTTTTAATTACATAC
AATATTGTTACATTGCTTAAAGTACTGTTTATTGTATTGTAAATATTTTGTATATTGTTT
TTAATATTGCTTTATTATTTTACTATACTAAATATACATGCCAAAAATA

InterProScan

Gene3D
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[70-180] 5.6E-28
SUPERFAMILY
RBD_domain_sf (IPR035979) - T[90-203] 6.58E-32
ProSiteProfiles
RRM_dom (IPR000504) - T[95-173] 18.325
SMART
RRM_dom (IPR000504) - T[96-169] 2.2E-23
Pfam
RRM_dom (IPR000504) - T[99-167] 1.2E-20

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
TRA2B_HUMAN 56 % 160 4.1E-48
TRA2A_HUMAN 70 % 151 1.5E-44
CIRBP_HUMAN 50.617 % 74.7 1.66E-16