- Transcript 'Cisavi.CG.ENS81.R268...' >
- Molecular Tool 'FoxF(TVC)>Tbx1/10' >
- Transcript 'Moocci.CG.ELv1_2.S49...'
Transcript Model
Transcript Id
Moocci.CG.ELv1_2.S493241.g18306.01.t
Possible name(s)
NONO; PSPC1; SFPQ
Gene model
Location
S493241 [2,828 / 5,197]
Amino acid sequence
Length: 317
>Moocci.CG.ELv1_2.S493241.g18306.01.p
MSKTGRYYQQSNSNFRKDIKPKIEPNLPERIESKKLSDLRPSPSTEILKKSAINDDNNQE
NPNAKPQEKKFTQRSRLFCGNLPLDISQDDFKAMFQKYGEISEIYLNNEKGYGFVRLDTR
ANAEQAKWELDGIQLKNRTIRVRYATHGAALSIKNFSPFVTNELLEKAFTQFGVVERAVV
ITDERGRSTERGIVEFARKSSANKALQQIKDGVFLITSSPRAVTAMPLEQEDAEDGLSEK
IVTQSPQFFLEREGQPRFAQVGTFEHEFGMRWKALDEMERQQREQLDKTIANAKAKLESE
MEDAIHEHKTMLMKQGV
Nucleotide sequence
Length: 1,013
>Moocci.CG.ELv1_2.S493241.g18306.01.t
TTTAGTCCTAACTTAATGAACCTGATAAAAGCATTTAAACTTGAGATTTAAAAAAAAACA
TGTCGAAAACTGGAAGATATTATCAACAGTCCAATAGTAATTTCCGAAAAGATATAAAAC
CCAAAATCGAACCTAATTTGCCAGAACGCATTGAGTCTAAAAAGTTAAGTGACCTACGAC
CATCTCCGTCTACAGAAATTTTAAAAAAATCTGCTATTAATGATGATAATAATCAAGAAA
ATCCAAATGCAAAACCACAAGAAAAGAAGTTTACACAGAGGAGTCGTTTATTTTGTGGAA
ATCTTCCTTTAGATATATCCCAGGATGACTTCAAAGCAATGTTCCAAAAGTATGGTGAAA
TATCAGAAATATACTTAAACAATGAAAAGGGATATGGTTTTGTAAGATTGGATACTCGAG
CAAATGCAGAACAAGCCAAATGGGAATTAGATGGAATTCAGTTAAAAAATAGAACAATTC
GGGTTCGTTATGCAACTCATGGTGCTGCACTCAGTATAAAGAATTTTTCACCTTTTGTAA
CCAATGAATTATTGGAAAAGGCATTTACACAATTTGGCGTTGTTGAACGTGCAGTAGTAA
TAACCGATGAACGCGGAAGATCTACAGAAAGAGGCATTGTAGAATTTGCTAGAAAATCTT
CTGCTAACAAAGCTTTACAACAAATTAAGGATGGAGTATTTTTAATAACATCTTCCCCAA
GAGCTGTCACTGCCATGCCCCTTGAACAGGAAGATGCAGAAGATGGATTAAGTGAAAAGA
TTGTTACACAATCACCCCAATTTTTTCTTGAAAGAGAAGGCCAGCCACGATTTGCTCAAG
TAGGAACATTTGAACATGAATTCGGAATGCGATGGAAAGCATTGGATGAAATGGAAAGGC
AACAGCGTGAACAATTGGATAAAACTATCGCAAATGCAAAAGCTAAACTAGAATCAGAAA
TGGAAGATGCAATTCATGAACACAAAACTATGCTCATGAAACAAGGTGTTTAA
| Gene3D |
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[52-149] 1.0E-23 - T[150-238] 3.1E-18 |
| SUPERFAMILY |
RBD_domain_sf (IPR035979) - T[75-210] 1.35E-31 |
| ProSiteProfiles |
RRM_dom (IPR000504) - T[75-147] 17.319 - T[149-230] 11.452 |
| SMART |
RRM_dom (IPR000504) - T[76-143] 6.3E-17 - T[150-219] 6.9E-7 |
| Pfam |
RRM_dom (IPR000504) - T[77-141] 2.4E-16 - T[152-208] 6.1E-13 |
| Pfam |
NOPS (IPR012975) - T[223-273] 9.0E-21 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| NONO_HUMAN | 54.98 % | 296 | 1.0E-97 |
| SFPQ_HUMAN | 59.363 % | 324 | 6.67E-106 |
| PSPC1_HUMAN | 60.159 % | 325 | 9.78E-109 |