Aniseed - Transcript Card

Transcript Model

Transcript Id

Moocci.CG.ELv1_2.S494864.g18554.01.t

Possible name(s)

FDPS; GGPS1; PDSS1

Gene model

Moocci.CG.ELv1_2.S494864.g18554

Location

S494864 [7,536 / 11,061]

Sequences

Amino acid sequence

Length: 198

>Moocci.CG.ELv1_2.S494864.g18554.01.p
MQMQAAFLVADDIMDQSETRRGKLCWYRKDNIGLQAINDSMILESCIFQLLKACCRQKPY
YADVMDLFHQVILNTELGQNLDMETSEQPTVDFSKFSYDRYLAIVKYKTAFYSFCLPVAV
AMHMAGIKENSIHEKTQEILIEIGTLFQIQDDYLDCYGDVKITGKVGTDIEDNKCSWLVI
KAIEKCTKEQLKILEVSG

Nucleotide sequence

Length: 597

>Moocci.CG.ELv1_2.S494864.g18554.01.t
ATGCAGATGCAAGCTGCGTTTTTAGTGGCTGATGATATAATGGACCAATCAGAAACAAGA
CGAGGAAAATTGTGCTGGTATAGGAAAGATAACATAGGTTTGCAGGCAATTAATGACAGC
ATGATTTTGGAGTCCTGCATTTTCCAGTTATTAAAAGCATGTTGTCGGCAGAAGCCTTAT
TACGCTGATGTAATGGATCTGTTTCATCAAGTTATTTTGAACACTGAATTGGGGCAAAAC
TTGGACATGGAGACTTCGGAACAACCCACTGTAGATTTTAGTAAATTTTCATATGACCGC
TATTTGGCCATCGTTAAATACAAAACTGCGTTTTATTCTTTTTGTTTACCTGTTGCCGTG
GCAATGCATATGGCTGGTATAAAAGAAAACTCAATACATGAAAAAACACAAGAAATTCTT
ATTGAAATTGGAACACTTTTCCAGATTCAAGATGATTATCTTGATTGCTATGGTGATGTC
AAAATTACAGGAAAAGTCGGAACAGATATCGAAGATAATAAATGTTCATGGCTCGTAATA
AAAGCTATTGAAAAATGTACCAAAGAACAACTTAAAATATTAGAAGTAAGTGGTTAA

InterProScan

Gene3D	Isoprenoid_synthase_dom_sf (IPR008949) - T[2-197] 3.2E-72
SUPERFAMILY	Isoprenoid_synthase_dom_sf (IPR008949) - T[3-194] 3.68E-61
Pfam	Polyprenyl_synt (IPR000092) - T[3-195] 5.4E-70
ProSitePatterns	Polyprenyl_synt_CS (IPR033749) - T[8-22] . - T[143-155] .

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
FPPS_HUMAN	56.995 %	244	2.73E-80