Aniseed - Transcript Card

Transcript Model

Transcript Id

Moocci.CG.ELv1_2.S496148.g18650.01.t

Possible name(s)

ECHDC2; ECHDC3; ECHS1

Gene model

Moocci.CG.ELv1_2.S496148.g18650

Location

S496148 [8,812 / 12,968]

Sequences

Amino acid sequence

Length: 227

>Moocci.CG.ELv1_2.S496148.g18650.01.p
MKLNKMHTKNCDIMASSCLPTWPIKHFEETLTPVQAMNTKRSFHFEVFNLCSEVMQLLQD
IPVPVICEVDGLATAAGCQLVATCDIAIASERATFCTPGEAQKFCSTPAVALGRSVPRKL
ALEMLFTGTIISAQRAELHGLVTKVVPEGKVHDEAMKMAEKICETSRSVTTMGKYSFYRQ
IVKDRSAAYKDASNVMVQNLHTHDGREGINAFVEKRKPIWNHKFDVD

Nucleotide sequence

Length: 684

>Moocci.CG.ELv1_2.S496148.g18650.01.t
ATGAAGTTAAATAAAATGCACACAAAAAATTGTGACATTATGGCGTCGTCATGTCTGCCA
ACATGGCCTATAAAGCATTTTGAAGAGACCTTGACTCCCGTTCAAGCAATGAATACAAAA
CGATCTTTTCATTTTGAAGTTTTTAATCTATGTAGTGAAGTTATGCAGCTTCTTCAGGAC
ATTCCTGTTCCCGTAATATGTGAAGTGGATGGTTTGGCCACAGCTGCAGGATGCCAGCTA
GTTGCGACATGTGACATTGCGATAGCATCAGAAAGAGCCACATTTTGCACTCCTGGTGAA
GCACAAAAATTCTGTTCAACACCAGCAGTTGCACTCGGACGATCTGTTCCACGAAAACTT
GCCTTGGAAATGCTGTTTACAGGAACCATCATTTCAGCACAAAGAGCTGAGCTTCATGGG
CTGGTGACAAAGGTCGTTCCGGAGGGAAAAGTTCATGATGAAGCAATGAAAATGGCCGAA
AAAATATGTGAGACAAGTCGGTCTGTAACTACGATGGGAAAATATAGCTTTTATAGACAA
ATTGTTAAAGACAGAAGCGCCGCTTATAAGGATGCGAGCAATGTAATGGTACAAAATCTC
CACACTCATGATGGAAGAGAAGGAATAAACGCTTTTGTTGAAAAACGAAAACCAATTTGG
AATCATAAATTTGATGTAGACTGA

InterProScan

SUPERFAMILY	ClpP/crotonase-like_dom_sf (IPR029045) - T[38-222] 3.09E-44
Pfam	Enoyl-CoA_hydra/iso (IPR001753) - T[52-222] 2.9E-34
Gene3D	enoyl-CoA_hydra_C (IPR014748) - T[166-222] 7.6E-24

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
ECHM_HUMAN	37.195 %	95.5	1.44E-23
ECHD3_HUMAN	52.83 %	225	9.12E-74