Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Transcript 'Phmamm.CG.MTP2014.S1...'
  2. Transcript 'Moocci.CG.ELv1_2.S49...'

Transcript Model

Transcript Id

Moocci.CG.ELv1_2.S497363.g18813.01.t

Possible name(s)

CLIP1; CLIP2; CLIP3

Location

S497363 [280 / 3,308]

Sequences

Amino acid sequence

Length: 237

>Moocci.CG.ELv1_2.S497363.g18813.01.p
MQNTKINTENEIENFKKATNSIKKLQTTLRLLNYYDNENELKVASGMPVFTFRRTLVPKI
IVKPSYPISSQISLLKCYPTTHHYTIGDRVLVSGNKPGRIQFLGETKFAAGQWAGVVLNE
PVGKNDGSVAGIRYFQCENLHGVFARPSKLIKQDGSTPSSKPVTDSSISKSSSSGLSTPS
KVKTVPLTAAALKSMETPKTPSKKMSVCHIGPSPAPISFLILYLFVISYKVEMAKKD

Nucleotide sequence

Length: 714

>Moocci.CG.ELv1_2.S497363.g18813.01.t
ATGCAAAACACAAAAATTAACACTGAAAATGAAATTGAAAATTTTAAAAAAGCTACAAAC
AGTATAAAAAAGCTACAAACAACTCTCAGGCTCCTAAATTATTATGACAATGAAAATGAA
CTAAAGGTTGCATCTGGAATGCCAGTATTCACCTTTAGAAGAACCTTAGTCCCTAAAATT
ATTGTCAAACCGAGTTACCCTATCTCATCTCAAATCAGTCTATTAAAATGTTACCCAACG
ACTCATCATTATACTATAGGTGACAGAGTCTTAGTAAGTGGGAATAAGCCGGGTCGGATC
CAGTTTTTGGGAGAAACAAAGTTTGCTGCAGGTCAATGGGCGGGAGTAGTACTAAATGAA
CCTGTGGGGAAAAATGATGGTTCGGTGGCTGGTATAAGATACTTTCAGTGTGAGAATTTG
CATGGTGTGTTTGCGCGTCCATCCAAACTTATCAAACAAGATGGTAGTACACCAAGCTCA
AAACCAGTTACAGACTCAAGTATTAGCAAAAGTTCCTCATCTGGTCTTTCAACTCCATCT
AAAGTAAAAACAGTTCCCTTAACTGCAGCTGCTCTTAAATCTATGGAAACACCTAAAACC
CCCTCTAAAAAGATGTCAGTCTGCCACATAGGTCCCAGCCCGGCGCCTATTAGCTTTCTA
ATATTGTATTTGTTTGTTATTTCTTATAAAGTTGAGATGGCCAAAAAAGATTAA

InterProScan

SUPERFAMILY
CAP-Gly_dom_sf (IPR036859) - T[67-171] 8.9E-34
Gene3D
CAP-Gly_dom_sf (IPR036859) - T[68-161] 2.0E-31
SMART
CAP-Gly_domain (IPR000938) - T[86-151] 1.3E-30
Pfam
CAP-Gly_domain (IPR000938) - T[86-150] 1.3E-21
ProSiteProfiles
CAP-Gly_domain (IPR000938) - T[104-146] 16.951
ProSitePatterns
CAP-Gly_domain (IPR000938) - T[104-135] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
CLIP1_HUMAN 51.773 % 127 1.81E-33
CLIP3_HUMAN 56 % 90.1 8.23E-21
CLIP2_HUMAN 47.107 % 116 1.11E-29