Aniseed - Transcript Card

Transcript Model

Transcript Id

Moocci.CG.ELv1_2.S506704.g19196.01.t

Possible name(s)

RDH11; RDH12; RDH14

Gene model

Moocci.CG.ELv1_2.S506704.g19196

Location

S506704 [15,563 / 19,039]

Sequences

Amino acid sequence

Length: 235

>Moocci.CG.ELv1_2.S506704.g19196.01.p
MSEAKVSSVKGGMVQSNVKLNGKTVVITGCNTGIGLETVIDLAKREAKIIMACRNLEKAE
IAKERVNHVYCSGVMACPPSKTEDGFELQMGTNHLGHFLLTILLLDLVKKSAPSRIVVLS
STAHEKKNIKDIFWDDINLEKNYNNWKAYQQSKLMNVMFGIELNKRLEGTGVTVYNVHPG
VVATELGRHLEFNFIVRGILKLVIPFVLKTPIQGAQTTIFCAIAPEILELTGSYF

Nucleotide sequence

Length: 705

>Moocci.CG.ELv1_2.S506704.g19196.01.t
ATGTCTGAAGCCAAAGTTAGCAGTGTCAAAGGAGGCATGGTACAAAGCAATGTAAAGTTA
AATGGGAAAACTGTGGTTATAACTGGATGCAACACCGGTATTGGACTCGAAACAGTAATT
GATCTAGCCAAGAGAGAAGCAAAGATCATAATGGCATGTAGAAACCTCGAAAAAGCAGAG
ATTGCTAAAGAAAGAGTTAATCATGTTTATTGTTCAGGTGTCATGGCTTGTCCTCCATCA
AAAACAGAAGATGGTTTTGAGCTACAGATGGGAACCAACCACCTTGGACACTTTTTGCTA
ACTATTTTGTTGTTGGACTTAGTCAAGAAAAGTGCACCTAGTCGCATAGTAGTATTGTCA
TCAACAGCGCATGAAAAGAAAAACATAAAAGATATTTTCTGGGACGATATAAATCTTGAG
AAGAATTACAACAACTGGAAAGCTTATCAACAGAGCAAACTAATGAATGTTATGTTTGGG
ATTGAGCTCAATAAGAGACTAGAAGGTACTGGTGTAACTGTCTATAACGTTCATCCAGGC
GTTGTTGCAACTGAATTGGGACGTCATCTTGAATTCAACTTCATAGTAAGAGGAATTCTT
AAACTTGTAATTCCGTTTGTGCTTAAAACACCAATCCAAGGCGCTCAAACAACTATATTC
TGTGCAATTGCTCCAGAGATTTTGGAATTAACTGGCAGTTATTTC

InterProScan

SUPERFAMILY	NAD(P)-bd_dom_sf (IPR036291) - T[20-235] 7.74E-38
Pfam	SDR_fam (IPR002347) - T[23-67] 1.6E-6
PRINTS	SDR_fam (IPR002347) - T[24-41] 4.8E-7 - T[108-124] 4.8E-7 - T[170-187] 4.8E-7

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
RDH11_HUMAN	43.561 %	183	5.94E-57
RDH14_HUMAN	40.602 %	181	7.51E-56
RDH12_HUMAN	45.038 %	185	7.24E-58