- Transcript 'KH2012:KH.C4.188.v1....' >
- Transcript 'Phfumi.CG.MTP2014.S1...' >
- Transcript 'KH2012:KH.C2.288.v2....' >
- Transcript 'Moocci.CG.ELv1_2.S56...' >
- Transcript 'Moocci.CG.ELv1_2.S51...'
Transcript Model
Transcript Id
Moocci.CG.ELv1_2.S516799.g19526.01.t
Possible name(s)
NXF1; NXF2; NXF2B
Gene model
Location
S516799 [175 / 8,324]
Amino acid sequence
Length: 435
>Moocci.CG.ELv1_2.S516799.g19526.01.p
QLIISTLDCLFTPFSDESMETIKIVLGNRYDGEKSHLDLSDLYSDPAFRNMRPKMKISYG
RDMQIIVNMITQNIADLTSLTLSENRIATLGVLLHLVPLAPNLKSLDLGRNNIRQFTEVQ
KLEGWDLTSLVLEGNPLCENFRSPEDYTNVVRDSFPNVMKLDGQTLTAPAKFDIDKASKL
PPAIKNHVPDGLKKIINQFTLQYFELFDKQRDQLLAAYHPTCMFSMRVAVHPRGPPLNRY
DAHNRNLLRLKGKSAKKSLLKHSQASVLSTLSSLPETEHDIAGFHVDVPFHASTLVKFVV
RGIFKELPKVQRDKPGKANNDLMRSFVRTFLCITDGERLTIINDMLYVRNPTGPELKSAF
LTPTPVTPSPSPVPEAKQAPNESAMIEQFMIDSGMNAEYSRNCLEQNSWDYQRAAANFMQ
LKSEGKIPAEAFVKC
Nucleotide sequence
Length: 1,308
>Moocci.CG.ELv1_2.S516799.g19526.01.t
CAGTTAATCATTTCTACATTGGACTGCTTATTTACTCCTTTTAGTGATGAAAGCATGGAG
ACAATTAAGATTGTCCTTGGAAACCGGTATGATGGCGAGAAATCACACCTTGACCTGTCT
GACCTCTACAGTGACCCTGCATTTCGCAACATGCGACCGAAGATGAAGATCAGTTACGGA
CGCGACATGCAAATCATCGTCAACATGATCACCCAAAATATTGCTGACCTCACGTCACTC
ACGTTATCGGAGAATCGAATTGCGACGCTCGGAGTTCTCTTGCATTTGGTTCCTCTTGCT
CCTAACCTTAAATCCCTCGACCTCGGGAGGAATAACATCCGTCAGTTTACGGAGGTGCAG
AAACTTGAAGGATGGGACCTTACCTCCCTCGTTTTGGAGGGAAACCCGCTGTGTGAAAAC
TTTCGATCGCCAGAGGATTACACTAATGTTGTGAGAGATTCCTTTCCCAACGTGATGAAG
CTGGACGGTCAAACGCTAACCGCCCCAGCTAAATTCGACATCGACAAGGCGTCAAAACTT
CCCCCGGCCATAAAGAACCATGTACCGGACGGTTTAAAGAAGATTATCAATCAGTTCACG
CTTCAGTACTTTGAGCTGTTCGACAAACAGCGCGACCAACTATTAGCAGCGTATCACCCC
ACTTGTATGTTTTCTATGCGAGTAGCTGTCCATCCGCGCGGCCCCCCACTCAACAGATAT
GACGCTCATAATCGAAACTTGCTTCGATTAAAAGGAAAAAGTGCAAAGAAATCTTTACTA
AAACACTCCCAAGCCTCTGTGTTGTCGACGCTGTCCAGCCTACCGGAGACGGAACATGAC
ATAGCCGGGTTTCATGTTGATGTTCCATTCCATGCGTCCACGTTGGTAAAGTTTGTCGTC
CGCGGAATATTTAAAGAACTCCCAAAAGTTCAACGAGACAAACCAGGCAAAGCGAACAAC
GATCTGATGCGAAGTTTTGTGCGGACATTTCTCTGCATAACCGACGGCGAACGGCTGACG
ATAATCAATGATATGCTCTACGTTCGCAACCCAACAGGACCCGAGTTAAAATCAGCATTT
TTAACACCAACTCCCGTTACACCCTCTCCAAGCCCTGTGCCGGAAGCCAAGCAAGCCCCA
AATGAATCCGCAATGATTGAACAGTTTATGATCGATTCCGGAATGAACGCGGAATATTCT
CGGAATTGCCTTGAACAGAACAGTTGGGACTATCAACGTGCGGCGGCAAACTTCATGCAG
TTGAAGAGCGAAGGGAAGATTCCAGCAGAAGCTTTTGTGAAGTGCTAA
| PANTHER |
NXF_fam (IPR030217) - T[13-433] 1.1E-107 |
| Gene3D |
LRR_dom_sf (IPR032675) - T[14-172] 4.6E-36 |
| ProSiteProfiles |
Leu-rich_rpt (IPR001611) - T[76-97] 7.712 - T[102-123] 8.082 |
| SUPERFAMILY |
NTF2-like_dom_sf (IPR032710) - T[190-366] 7.12E-40 |
| ProSiteProfiles |
Nuclear_transport_factor_2_euk (IPR018222) - T[195-348] 14.742 |
| SUPERFAMILY |
UBA-like_sf (IPR009060) - T[368-434] 9.44E-18 |
| SMART |
TAP_C_dom (IPR005637) - T[371-434] 7.4E-25 |
| ProSiteProfiles |
TAP_C_dom (IPR005637) - T[380-435] 25.915 |
| CDD |
TAP_C_dom (IPR005637) - T[384-432] 3.01763E-22 |
| Pfam |
TAP_C_dom (IPR005637) - T[385-432] 2.1E-22 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| NXF1_HUMAN | 37.264 % | 283 | 2.01E-89 |
| NXF2_HUMAN | 33.953 % | 245 | 1.01E-74 |
| NXF5_HUMAN | 29.72 % | 126 | 1.71E-32 |