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  1. Transcript 'KH2012:KH.C4.83.v2.A...' > 
  2. Transcript 'KH2012:KH.C11.698.v1...' > 
  3. Transcript 'Harore.CG.MTP2014.S1...' > 
  4. Transcript 'KH2012:KH.L147.3.v1....' > 
  5. Transcript 'Moocci.CG.ELv1_2.S52...'

Transcript Model

Transcript Id

Moocci.CG.ELv1_2.S524011.g19828.01.t

Possible name(s)

CDT1

Gene model

Moocci.CG.ELv1_2.S524011.g19828

Location

S524011 [7,104 / 16,659]

Sequences

Amino acid sequence

Length: 428

>Moocci.CG.ELv1_2.S524011.g19828.01.p
MARRAKELEEKQKIAELKPDHAREKREFAYEKLHSLAQETPKGLLLPLKYKNLLEMFKST
DTVVGMLFNRQQTTTWSILQKSVKDMARKNFEKMNLAQIKTVFPEAYLYRQEKGLISYED
SIKQSDYQLTIEPVLNTEECRVFGENPKKLTSNMLIRRRHHFNVQLLNIVKEQHKKFLST
LSPPMEVPHDQLKRWHPQFKLDQVLDISPSELPVSPLEVEGRCSSAKDVLEKARNKFTKK
AVEALKKVAERVTPEKNKKRNFIMEENNNFTLAKDPATKPDTIVATPTKTVTSDPSLRGV
SKSLLEKIRAKEADQKLRSMIRPDEAVEKIAQLKKLPDIARALRMLFITEKKAALPMELI
CDRLAKCSKGITSSIVVRELVELLSQEVPCWVSAAKVRNIDYIKMNRGREISEVLQEIDS
RIIQAEKS

Nucleotide sequence

Length: 2,586

>Moocci.CG.ELv1_2.S524011.g19828.01.t
CGACGTTATCATTTTGTTTACTAGCGTAGATATAGTTTATCGAGTTTTGCGTTACAGTAA
GATAAGCATTTACATAGATATTTAAAATGTCGCAACCAGCAGTAACAGAGTACTTTTCAA
AAAGGAGAAAACGAGTTTGCGTACAACCATCTAAACGTTTGAAAGTTTCTGATTCAGCTA
ACGAAGTTGAAGGTTGCAAATCCAAGATAGAGACTCGAAATACTTTTGTTAAAGAACTCC
GAGAAATAAAAGCCGAAACTACAAACGCTCCTGTTCGTAGAAGCAAACGAACCACCACCA
AAAGAAGCTGCAAATCTAACACTAAAAAAGCACCAGTTAATTGCAAAAACATTAAAGATC
TTTTTCCTGTAGCTCCCGAGGAAAATTACCTGTTAGATTCAGGGGACTTAAAACTGTCTA
TTACGCCATCATCATCAGATACCAACAGCGACACTATGATTGACGTCGTCACCTCTTGTA
AAGACAATCATGATGAACCACCATCGCCAACAAAACGATCTAAGAATTCTTCAAGACAAA
ATCCCAAAAGAAGTCGAGTTACTCCGCGTAAAAACAAAGCCTATAATTTTGATGCTGCAG
CCTACCAGTCTGACACTTTTCAGCCTAACTTGGAATTCCCACTCAAGACGAGAAAAACTG
CTAAAAAGAAACTTACCTTGGTTGGGAATAAAAATGTTGAAAAAAACAATAACGAGACTA
TTAGCAGTTCAAAAGCTTTTAACACTGTGTCTCCAAACAATAAACAAATAACTACCTCCA
AACCAAAAGAAGCGCTGAAACCCGTCGACACAAACGAGGAAAAGTTGTCTGCCAGGGAAT
TGAGAAAAAGAAATCGTGAAAAAACGAATGCACTTGTCGAAAAACTGATGGCAAAGAAAA
AAGTGAGTAGTACATATCCTATTTGTTGCTAACCCCCATTATTTAATGAAAAACCCAATA
AANTTTGCTAAAGATTCGTGAACAAAAGAAGAAAGCTCAGTCGGAAGAGAACATAAAGAA
GCACAAGGAGAGAATGGCAAGACGCGCAAAAGAACTTGAAGAGAAGCAAAAGATTGCTGA
ATTGAAACCGGATCACGCCAGAGAAAAACGAGAGTTTGCGTATGAGAAATTGCACAGCTT
AGCGCAAGAGACACCCAAAGGATTGCTATTACCACTCAAGTATAAGAACCTGCTTGAAAT
GTTCAAGAGTACTGACACCGTGGTGGGAATGTTGTTTAACCGTCAGCAAACGACGACGTG
GTCTATCTTGCAGAAGTCCGTCAAAGACATGGCCAGAAAAAACTTTGAAAAGATGAACTT
GGCCCAGATTAAAACAGTTTTTCCAGAAGCCTATCTTTATCGTCAGGAAAAGGGCCTTAT
CTCATATGAGGATTCTATCAAACAGTCTGATTATCAGCTTACAATAGAGCCTGTACTTAA
TACTGAAGAATGTCGTGTATTTGGCGAAAACCCCAAAAAACTAACAAGCAACATGCTCAT
TCGGCGTCGGCACCATTTTAACGTCCAACTGTTGAACATCGTCAAAGAACAACACAAGAA
ATTTCTGTCGACTCTATCTCCCCCGATGGAGGTGCCTCATGACCAGTTGAAACGGTGGCA
TCCTCAGTTCAAATTGGACCAAGTGTTGGACATTTCGCCTTCGGAGCTGCCCGTCTCGCC
TCTAGAGGTGGAAGGCAGATGCAGCTCAGCAAAAGATGTTTTAGAAAAAGCCAGAAATAA
GTTCACTAAAAAGGCTGTTGAAGCATTAAAGAAAGTTGCTGAACGCGTCACACCAGAAAA
AAACAAGAAGAGAAACTTCATAATGGAGGAAAACAACAATTTTACCCTCGCTAAAGATCC
CGCTACTAAACCTGACACTATTGTTGCAACTCCAACTAAAACTGTTACCTCTGACCCATC
ATTGAGAGGAGTTTCAAAATCCCTTTTGGAAAAGATCCGGGCTAAAGAGGCGGACCAGAA
ACTACGGTCCATGATTCGTCCTGATGAAGCCGTGGAAAAGATTGCACAACTGAAGAAGCT
TCCGGACATTGCTCGTGCGCTGCGGATGCTTTTTATAACAGAGAAAAAAGCCGCCCTTCC
GATGGAATTGATTTGCGATCGACTTGCTAAGTGCTCTAAAGGGATTACCTCTAGTATTGT
TGTACGTGAGCTAGTGGAGTTGCTATCACAGGAAGTCCCCTGCTGGGTCTCTGCGGCAAA
AGTACGAAACATCGACTACATCAAGATGAACCGGGGGAGAGAAATCTCGGAGGTGTTACA
GGAAATAGACTCAAGAATAATACAAGCTGAAAAATCTTAATACCACTTTTAACTTTTCGA
TTTAGTTCATGTGACTAATAGTTTGTAAAATTGTCTTACATAAACACAAGTCATTTGCTC
AAATTGCCTTGCAGAAGAACACCCTTATTCAGTCATGACAAGATAACGTAACTTTGGACT
TTGTTTAAATGTGTTTTAAAATTCGTTTGATTTTTTTTTAATTCAATTTAATTGAGTATT
TTAATGTGTCACTTGATGATTTACCTTTGTTTTTAAGCAAATAAACGCCAAATAATTTTT
ATCTAA

InterProScan

SUPERFAMILY
WH_DNA-bd_sf (IPR036390) - T[29-216] 1.25E-46
Pfam
CDT1_Gemini-bd-like (IPR014939) - T[46-213] 6.8E-53
SMART
CDT1_Gemini-bd-like (IPR014939) - T[46-214] 5.1E-67
Pfam
Cdt1_C (IPR032054) - T[301-393] 1.7E-18

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
CDT1_HUMAN 38.5 % 278 1.77E-88