Aniseed - Transcript Card

Transcript Model

Transcript Id

Moocci.CG.ELv1_2.S525700.g19909.01.t

Possible name(s)

RDH12; RDH13

Gene model

Moocci.CG.ELv1_2.S525700.g19909

Location

S525700 [5,166 / 8,770]

Sequences

Amino acid sequence

Length: 212

>Moocci.CG.ELv1_2.S525700.g19909.01.p
MAGIDKTSSKNGWVTSDVKLTGKTVIITGCNTGIGLETAIDMAKREAKVKMACRNMENAE
VAKERIMGESKSDKVFIKQLDLGSLKSVRKLAEDINNTEERLDILINNAGIMRCPQSKTE
DGFEKQMGTNHLGHFLLTNLLLDLLKKSSPSRVVVLSSVVGEEFYVEDIQWDDIQSENNY
GEWSAYFQSKLMNLMFAKELNDRYEVQAHAQN

Nucleotide sequence

Length: 639

>Moocci.CG.ELv1_2.S525700.g19909.01.t
ATGGCTGGGATAGACAAAACTAGTTCTAAAAATGGCTGGGTAACGAGCGATGTTAAACTA
ACAGGTAAAACTGTGATCATAACTGGATGTAACACTGGGATCGGACTCGAAACCGCCATT
GATATGGCAAAGAGAGAAGCCAAGGTTAAAATGGCTTGTAGGAACATGGAGAATGCAGAA
GTTGCCAAAGAAAGGATCATGGGGGAATCAAAATCAGACAAAGTTTTTATAAAGCAACTG
GATTTAGGTTCTCTTAAATCTGTTCGCAAACTTGCTGAAGATATCAACAATACTGAAGAA
CGACTTGATATACTTATAAATAATGCCGGTATAATGAGATGTCCACAATCTAAGACAGAA
GACGGATTTGAAAAACAAATGGGAACAAATCATCTTGGCCATTTCTTACTGACCAATTTA
TTGTTGGACTTGCTAAAAAAAAGTTCTCCGAGTCGTGTGGTCGTATTGTCTTCTGTCGTA
GGTGAAGAGTTTTACGTGGAAGACATTCAATGGGATGACATACAGTCTGAGAATAATTAC
GGAGAGTGGTCAGCCTACTTCCAAAGTAAATTAATGAATTTAATGTTTGCCAAAGAACTC
AACGATCGCTATGAAGTGCAGGCACATGCACAGAATTAA

InterProScan

SUPERFAMILY	NAD(P)-bd_dom_sf (IPR036291) - T[20-204] 7.7E-43
Pfam	SDR_fam (IPR002347) - T[23-163] 1.3E-26
PRINTS	SDR_fam (IPR002347) - T[24-41] 2.6E-10 - T[100-111] 2.6E-10 - T[145-161] 2.6E-10

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
RDH11_HUMAN	46.632 %	167	4.34E-51
RDH13_HUMAN	50.761 %	177	1.0E-54
RDH12_HUMAN	48.969 %	173	2.34E-53