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TRANSCRIPT CARD

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  1. Clone 'cima007j09' > 
  2. Transcript 'Moocci.CG.ELv1_2.S52...'

Transcript Model

Transcript Id

Moocci.CG.ELv1_2.S528489.g20069.01.t

Possible name(s)

COPS2; PSMD11

Gene model

Moocci.CG.ELv1_2.S528489.g20069

Location

S528489 [39,591 / 44,750]

Sequences

Amino acid sequence

Length: 420

>Moocci.CG.ELv1_2.S528489.g20069.01.p
MAAAMELERAQSLSLNDQSKAINVYKDILKRDIQSTDEEGIKLKEQSILELGNLLQKEGH
AAELGGLVKLVRPFLNSISKAKAAKLVRTLVDLFLDMEAGTGLEVQLCLECIEWAKEEKR
TFLRQALEARLVQLYFDTKRYQDALKLGMQLLRELKKLDDKQLLVEVQLTESRTYHALSN
LQKARAALTSARTTANSIYCPPKMQSALDLQSGILHAAEEKDWKTAYSYFYEAFEGLDSI
ESKKAITALKYMLLCKVMLKTPEDVHSLVSGKLALKYSGRDIDAMKDIAKASQNRSISEL
KLTLSNYEVELKADSIISAHLDKLYDNLLKQNLLRIIEPFAKVQVSHVAHIINLPLDIVE
KKLSQMILDKKFYGILSQGEGVLILFDEPAVDKTYETALEVIAGMSLVVDSLYHKAKQLT

Nucleotide sequence

Length: 2,042

>Moocci.CG.ELv1_2.S528489.g20069.01.t
TATTAGTTTTCAGATAAAAAATAAATTTAATATTTATAAAAATACTTCGAAAAAACAACT
ACAGGATATCTTGTCTTATTAAGAAGGAGTTTATAAATTAAAATGGCTGCAGCAATGGAA
CTGGAAAGAGCTCAGTCTTTAAGTCTTAATGACCAGTCCAAAGCAATTAATGTATACAAA
GATATACTAAAGAGAGATATACAAAGTACTGATGAAGAGGGAATAAAGCTTAAAGAACAA
AGCATTTTGGAACTTGGAAATTTGTTACAGAAAGAGGGGCATGCTGCAGAACTTGGAGGA
CTTGTTAAACTAGTAAGACCTTTCCTTAATTCCATCAGTAAAGCTAAAGCCGCCAAATTA
GTCAGAACACTTGTTGATTTGTTCCTTGATATGGAAGCAGGCACTGGTCTTGAAGTTCAG
TTATGTTTGGAATGTATTGAATGGGCAAAGGAAGAAAAAAGGACATTTTTGCGTCAGGCT
CTGGAAGCAAGGCTTGTTCAACTATATTTTGATACAAAACGATACCAAGACGCACTAAAA
TTAGGAATGCAACTGTTAAGGGAATTAAAAAAGCTTGATGATAAGCAACTACTTGTTGAA
GTCCAACTTACAGAATCAAGAACTTACCATGCCCTCAGCAATTTGCAGAAAGCTCGAGCT
GCCTTAACGTCTGCCCGCACAACAGCTAACTCCATTTATTGTCCGCCCAAAATGCAATCA
GCACTTGACTTACAATCCGGTATTTTGCATGCTGCCGAAGAGAAGGACTGGAAAACTGCA
TACTCGTATTTCTATGAAGCATTTGAAGGGTTGGACTCAATTGAAAGCAAAAAAGCAATA
ACCGCTCTGAAATACATGTTACTTTGTAAAGTAATGTTAAAAACGCCTGAAGATGTGCAT
TCTTTAGTTAGTGGAAAACTGGCGTTAAAATATTCTGGTCGAGATATTGATGCTATGAAA
GACATTGCAAAAGCCAGCCAAAACCGATCCATATCCGAACTTAAATTAACACTTTCAAAT
TATGAAGTTGAACTAAAAGCTGACTCAATAATTTCCGCCCACCTTGATAAACTATACGAC
AATTTGCTGAAACAAAATCTACTTCGAATCATTGAACCATTTGCAAAAGTTCAAGTTTCT
CATGTAGCTCATATCATCAACCTTCCTCTGGACATCGTTGAGAAAAAATTATCACAAATG
ATTTTGGATAAAAAATTTTATGGTATTCTCTCGCAAGGGGAGGGTGTGTTAATATTATTC
GATGAACCTGCAGTTGACAAAACGTACGAAACGGCATTAGAAGTTATCGCAGGAATGTCC
CTTGTAGTTGACAGTCTCTACCATAAAGCTAAACAGTTGACATAATGTTTATTATCATTC
ATATTTTGTTTTGTTTATACCTGTACAGTTTTTTTTCCTAATTTTTATTTCCTAAATTTA
GTTTTAGTTAAACCAGGATCAGTACTTGTAGATACCATCATTTTTTCTTTTCTTTTTTTC
GCCAGGGTTTACTTATTTTGCAAATGTGCAATTTTTTATTCGACTGTTATGAAAATTAAA
AAGATAGGAAATAGGTGACACCATAAGTATACAAAAATTAAGCGCTGGGTCTAAAAAATC
TTACCAATTTTACTTTTGGCTTTAAATGGCTTGGTGGTTCAAATATTATCAATTTCAAAT
TAAAATATAATTTGTAAGGTACTTTTAATTAAACGAACAAACTTACTGAGGTTGTATATT
AAATATTGTTTTTTATTCCATCCTACACTCTATATATACTTTTGTTTTCTGATTTATTGA
AATAAAACATGTTTTAGTATTTTTTACAAGAAGCTGATTGTGCCATAAATATTAGAAAAA
AAACTGATTTAAATGATTAAAATTGAAATTGTTGATGATTTGAATTCTGGTGCAACTGTT
TACGAATTTTTGTAAAATATTTCACTTTTGTTCTCTATTTAAAACATTTTTTATTTGTTT
GCACAACCTAAAAATTTTCCTTGAATATACATATGTAACTTTATGGACGTTGATTAAAAT
AA

InterProScan

PANTHER
PSMD11 (IPR035295) - T[2-420] 2.3E-211
Pfam
PCI_dom (IPR000717) - T[283-385] 2.3E-14
SUPERFAMILY
WH_DNA-bd_sf (IPR036390) - T[314-395] 5.44E-15
SMART
PCI_dom (IPR000717) - T[319-402] 4.9E-16

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
PSD11_HUMAN 73.031 % 637 0
CSN2_HUMAN 24.731 % 80.5 2.37E-16