- Clone 'cien147770' >
- Transcript 'KH2012:KH.C9.770.v1....' >
- Transcript 'Cisavi.CG.ENS81.R54....' >
- Transcript 'Cisavi.CG.ENS81.R151...' >
- Transcript 'Moocci.CG.ELv1_2.S52...'
Transcript Model
Transcript Id
Moocci.CG.ELv1_2.S528899.g20091.01.t
Possible name(s)
CELSR3; PCDHA11; PCDHA12
Gene model
Location
S528899 [19,914 / 24,704]
Amino acid sequence
Length: 403
>Moocci.CG.ELv1_2.S528899.g20091.01.p
MESSKPLEYHLKLKENLGENTLITTLAARDDDDGNLGMVRYFLPKIGNSEKAQNLLTIDP
ENGEVRLKQELDREEHNGMRIVIGAKDSANKSQGGPKVGKTVIVIDVEDVNDNAPVIKVN
VVLKGNDREVAYVPEDVTRGTFIAQISATDKDTDANGEVELSMTSFPPGYAIVLIEDLVK
VNMPLDREEVNRYVLQITACDKGKRPKCSHKNVTVEVVDINDNSPRFSNVKKSFVVRENM
KVGTLLTRVSAFDDDSLNPPALRKVSKNNFQKSMNGDIRYSITGGGAAFAIESTSGKITL
VGSLDYEEKNMYKLVVKARDLGSPRRSNNTTIMVTVLDLVVKARDLGSPRRSNNTMIMVT
VLDVNDHRPEFSNPAVDNSSIISTILETGPIAKIKNDKFVTLM
Nucleotide sequence
Length: 1,212
>Moocci.CG.ELv1_2.S528899.g20091.01.t
ATGGAATCTTCGAAACCGCTTGAATATCACTTGAAGTTAAAAGAAAACTTAGGGGAAAAC
ACGTTAATAACGACGTTGGCTGCTCGTGACGATGATGACGGCAATCTCGGAATGGTACGA
TACTTTCTGCCCAAAATCGGAAACTCGGAAAAAGCACAAAATCTTTTGACCATTGACCCG
GAAAATGGCGAGGTCAGGCTGAAACAGGAGCTGGACCGTGAAGAGCATAATGGTATGAGA
ATAGTAATTGGGGCTAAGGATTCAGCCAATAAAAGTCAAGGAGGTCCCAAAGTGGGGAAG
ACTGTGATTGTAATTGATGTGGAAGATGTAAACGATAATGCTCCTGTAATAAAAGTCAAC
GTTGTTTTGAAGGGGAACGACCGAGAAGTTGCATATGTACCCGAAGATGTGACAAGAGGA
ACTTTTATTGCACAAATATCAGCTACTGATAAAGATACGGATGCCAATGGAGAAGTTGAG
CTTAGTATGACGTCATTTCCTCCAGGATATGCCATAGTTTTAATCGAAGATTTAGTAAAA
GTTAACATGCCTCTAGACAGAGAAGAGGTTAATCGATACGTCCTACAAATAACAGCGTGC
GATAAAGGAAAAAGGCCAAAGTGCTCACATAAAAACGTAACAGTGGAAGTTGTAGACATA
AACGACAATTCTCCAAGGTTCAGCAACGTGAAAAAATCATTTGTGGTTCGAGAAAATATG
AAAGTGGGAACTCTACTGACTCGAGTGTCAGCTTTTGACGACGACTCTTTGAATCCACCA
GCTTTAAGAAAAGTTTCGAAAAACAACTTCCAAAAATCAATGAACGGAGACATAAGGTAC
TCGATTACCGGTGGAGGAGCTGCTTTTGCCATAGAATCGACTTCTGGAAAGATAACTTTG
GTTGGGTCCCTTGATTACGAGGAAAAGAATATGTATAAGCTTGTGGTTAAAGCACGTGAT
TTGGGGTCACCACGAAGGTCAAACAACACGACGATAATGGTCACTGTTCTAGATCTTGTG
GTTAAAGCACGTGATTTGGGATCACCACGAAGGTCAAATAACACGATGATAATGGTCACT
GTTCTAGATGTGAATGACCACAGACCTGAATTTTCGAACCCAGCAGTTGATAATTCCAGT
ATTATCTCAACTATACTTGAAACTGGGCCCATTGCTAAAATTAAGAATGACAAATTTGTT
ACTTTAATGTAA
| SUPERFAMILY |
Cadherin-like (IPR015919) - T[8-122] 5.14E-16 - T[110-219] 1.36E-17 - T[220-338] 9.99E-24 - T[338-374] 1.26E-5 |
| Pfam |
Cadherin (IPR002126) - T[9-107] 8.2E-13 - T[131-217] 3.3E-13 - T[233-337] 9.2E-17 |
| SMART |
Cadherin (IPR002126) - T[26-115] 1.0E-17 - T[146-225] 5.1E-18 - T[265-369] 2.4E-18 |
| PRINTS |
Cadherin (IPR002126) - T[54-73] 2.2E-32 - T[124-153] 2.2E-32 - T[192-204] 2.2E-32 - T[206-225] 2.2E-32 - T[225-238] 2.2E-32 - T[294-320] 2.2E-32 - T[353-370] 2.2E-32 |
| ProSitePatterns |
Cadherin_CS (IPR020894) - T[105-115] . - T[215-225] . - T[359-369] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CELR3_HUMAN | 28.967 % | 145 | 8.9E-38 |
| PCDAB_HUMAN | 33.934 % | 148 | 6.79E-39 |
| PCDAC_HUMAN | 33.033 % | 151 | 6.25E-40 |