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TRANSCRIPT CARD

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  1. Region 'REG00000299' > 
  2. Transcript 'Phmamm.CG.MTP2014.S1...' > 
  3. Transcript 'KH2012:KH.L37.33.v1....' > 
  4. EST 'AHC0AAA226YD18_RM1' > 
  5. Transcript 'Moocci.CG.ELv1_2.S52...'

Transcript Model

Transcript Id

Moocci.CG.ELv1_2.S528899.g20092.01.t

Possible name(s)

PCDH12; PCDH17; PCDH18

Gene model

Moocci.CG.ELv1_2.S528899.g20092

Location

S528899 [25,020 / 27,541]

Sequences

Amino acid sequence

Length: 555

>Moocci.CG.ELv1_2.S528899.g20092.01.p
RYYIHRENDNKYPAIFILNPISGELRFNTSNNLREIIGDHKICIKAIDGGKPPLSSSTTL
YIRVTDLPLSAIREKNGLPEEGLEPTVIILASLAAATIVLLLILAFIIVKCRKESKEIRT
YNCRKAENTGGWISKPMTPPRDSSIDEVVVVTSPNNVTSTRDANFMRAMELGRQRSVISN
RPSSRSSSEGKETSTTKDENLSTMNSHRHYDEYKRDVQTKSILDGDSGKGESDRESDRGE
KDVTRAHSVTPNYHHQSMQYLNSMGPRCTENCRLYGHCDECWLNVSATALNKTMPTMPQH
QSRNIDLGYALHPMNRYPNYPNPADDNFDNCSLETIGETQPLRYALESPSSPHNLPPMQD
YPVYPSYNPHANHLMNQSYEEYYYPTIPEEMEYPREQYSGTNLIQQQNQVPDSYYTYSHR
PSSRSHSPSPTTSTSTLKPSYPSPISPNFEEAINNRDKLERPSSRNSIANPESSSVSEKI
KMFTNSGTNAVQRRPSGASLRDNLLQKRLLQKSASFSSPHSKIDDQDSSTLNYSGETTMQ
EAEEIISDIDQLISH

Nucleotide sequence

Length: 1,665

>Moocci.CG.ELv1_2.S528899.g20092.01.t
CGATATTATATACACAGAGAAAATGATAACAAATATCCAGCGATTTTTATCCTTAATCCA
ATTTCCGGTGAACTTAGGTTTAACACAAGCAATAATCTTAGGGAAATAATTGGTGATCAC
AAAATTTGTATAAAGGCTATAGATGGTGGGAAACCTCCGTTATCAAGTAGTACGACTTTG
TACATCAGAGTGACTGACCTGCCTCTGTCTGCAATTAGAGAAAAAAATGGATTACCAGAG
GAGGGACTTGAACCTACAGTCATAATACTGGCATCGTTAGCTGCAGCCACAATAGTCTTG
CTATTGATTTTGGCATTCATTATTGTGAAATGCAGAAAAGAAAGCAAGGAGATTCGAACA
TATAATTGTCGCAAAGCTGAAAACACTGGCGGGTGGATTTCCAAACCAATGACGCCACCT
CGTGATAGTAGTATTGATGAAGTTGTGGTGGTGACGTCACCAAATAATGTGACGTCAACA
CGAGATGCAAATTTTATGAGAGCAATGGAATTAGGAAGACAAAGATCAGTAATTTCAAAT
CGACCATCATCTCGATCATCTTCAGAAGGAAAAGAAACATCCACAACAAAGGATGAAAAC
CTAAGCACGATGAATTCACATAGACATTATGACGAGTATAAAAGAGATGTACAAACAAAG
AGTATTTTGGATGGAGACAGCGGAAAAGGAGAAAGTGACAGAGAAAGCGATAGAGGTGAA
AAAGATGTAACCAGAGCACATTCTGTCACTCCAAACTACCATCATCAATCGATGCAGTAT
CTTAACAGCATGGGTCCAAGATGCACCGAAAACTGCAGATTATATGGGCACTGTGATGAG
TGTTGGTTGAATGTTTCTGCTACTGCTTTAAACAAGACGATGCCAACAATGCCACAACAT
CAATCACGAAACATTGATCTAGGATATGCATTACACCCAATGAATCGCTACCCAAATTAT
CCAAATCCTGCTGACGACAACTTCGACAATTGCAGTTTGGAAACAATCGGTGAAACACAG
CCACTACGATATGCTTTGGAGTCCCCTTCGTCACCCCATAACCTACCCCCAATGCAAGAT
TACCCAGTTTACCCTAGTTATAACCCCCACGCCAACCATCTAATGAATCAAAGCTATGAA
GAGTATTATTACCCGACAATACCAGAAGAAATGGAATACCCAAGGGAGCAATATTCAGGA
ACAAATTTGATCCAACAACAAAACCAAGTTCCTGATTCGTATTATACATATTCCCATCGT
CCTAGTTCTCGTAGCCATTCTCCCTCGCCTACGACTTCAACATCAACACTTAAGCCTTCC
TACCCTTCTCCAATTTCACCTAATTTTGAAGAAGCTATCAATAACAGAGATAAACTTGAA
AGGCCATCATCTCGCAACTCAATTGCTAACCCTGAATCGTCAAGTGTTAGCGAAAAGATT
AAAATGTTTACGAACTCAGGTACTAATGCGGTTCAGAGACGACCCTCTGGCGCTAGCTTG
CGGGATAATTTATTACAGAAAAGACTGTTACAGAAAAGCGCATCTTTTTCCTCCCCACAT
TCCAAAATAGATGACCAAGATTCTTCAACTTTAAACTATTCCGGTGAAACGACGATGCAA
GAAGCTGAAGAAATAATATCAGACATTGATCAATTGATTTCGCAT

InterProScan

SUPERFAMILY
Cadherin-like (IPR015919) - T[1-66] 2.57E-8

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value